KEGG   Daucus carota (carrot): 108193964
Entry
108193964         CDS       T05350                                 
Name
(RefSeq) ubiquitin-ribosomal protein eS31 fusion protein
  KO
K02977  ubiquitin-small subunit ribosomal protein S27Ae
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03010  Ribosome
dcr04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108193964
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    108193964
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:dcr03011]
    108193964
   04121 Ubiquitin system [BR:dcr04121]
    108193964
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dcr04147]
    108193964
Ribosome [BR:dcr03011]
 Ribosomal proteins
  Eukaryotes
   Small subunit
    108193964
  Archaea
    108193964
Ubiquitin system [BR:dcr04121]
 Ubiquitins and ubiquitin-like proteins
  Ubiquitins
   108193964
Exosome [BR:dcr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   108193964
  Exosomal proteins of colorectal cancer cells
   108193964
SSDB
Motif
Pfam: ubiquitin Ribosomal_S27 Rad60-SLD Ubiquitin_2 Rad60-SLD_2 Plexin_RBD Dsc3_N TBK1_ULD Ubiquitin_5 Fer2_3 DUF2604 UBL_UBAC1 OTU1_UBXL Thioredox_PDIA6_C
Other DBs
NCBI-GeneID: 108193964
NCBI-ProteinID: XP_017216315
UniProt: A0AAF0XJJ7
LinkDB
Position
7:9579321..9580038
AA seq 157 aa
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
IQKESTLHLVLRLRGGGKKRKKKTYTKPKKIKHKHRKVKLAVLQFYKVDESGKVQRLRKE
CPNGECGAGTFMANHFDRHYCGKCGLTYVYQKAAGGD
NT seq 474 nt   +upstreamnt  +downstreamnt
atgcagatcttcgtgaaaaccctcaccggcaaaactatcaccctggaggtggaatcctcc
gacacaatcgacaatgtcaaagccaagattcaagacaaagaaggcatcccgccggaccag
cagcgcctcatcttcgccggcaagcagctcgaggacggcagaaccctagccgactacaac
atccagaaggagtccactctccacctcgttctccgcctccgcggcggcggcaagaagcgc
aagaagaagacctacaccaagcccaagaagatcaagcacaagcacaggaaagtcaagctc
gcggtgctgcagttctataaggtggatgagagtggtaaagtgcagaggctcaggaaggag
tgccctaatggagagtgtggggccgggaccttcatggccaatcattttgataggcattat
tgtggaaaatgtggccttacttatgtctaccagaaggctgccggtggtgattga

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