Daucus carota (carrot): 108194127
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Entry
108194127 CDS
T05350
Name
(RefSeq) syntaxin-related protein KNOLLE
KO
K08486
syntaxin 1B/2/3
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108194127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108194127
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108194127
Membrane trafficking [BR:
dcr04131
]
SNARE
Syntaxin (Qa)
Stx-PM
108194127
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
108194127
Exosomal proteins of other body fluids (saliva and urine)
108194127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
T2SSF
Piezo_THU9_anchor
LarA_C
Synaptobrevin
ZapD
Spectrin_1st_PEPL
Motif
Other DBs
NCBI-GeneID:
108194127
NCBI-ProteinID:
XP_017216515
UniProt:
A0A164T5V5
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Position
7:13647532..13649278
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AA seq
310 aa
AA seq
DB search
MNDLMTKSWKSYVDLKKEALKDLEAGPDVEMSKTTQMDEGLTSFLAEAEIVKSEMNSIKD
ILVQLQQASEDSKSLHKPEALKSIRSKINSNVVLVLKMARSIKGQLEEMDRSNAVNRRLS
GCKDGSPVDRTRSAVTNGLRKKLKELMMDFQGLRQRMMSEYKDTVGRQYYTVTGEYPNED
VIEKIISDGNGGEQFMAKAIQEHGRGKVLETVVEIQDRHDAAKEIEKSLLELHQVFLDMA
VMVEAQGEQMDDIEHHVMNAAQYVTDGSKNLKTAKGYQKSSRRCMCIGIILLLILILVIV
LPIATSFSKS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatcttatgacaaagtcatggaagagctatgtggatctaaagaaagaggccttg
aaagatctcgaagcaggccctgatgtcgagatgtcgaagactacccagatggatgaaggg
ctcacttcatttttagctgaagcggagattgtcaaatcagagatgaattcaatcaaagac
atcttggttcagctccaacaggccagtgaagacagcaagtcccttcacaaacccgaggcc
ttaaagtcgatacgaagcaagattaattctaatgttgtgttggtgcttaaaatggctagg
tcaattaagggtcagctggaagagatggacaggtctaatgctgtgaataggaggctttcg
gggtgtaaggatgggagtccggtggataggactaggtccgcggtgacgaatgggctgagg
aagaagttgaaggagctgatgatggattttcaggggttgaggcagaggatgatgagtgag
tacaaggatactgtgggaagacagtattacactgtgacgggtgagtacccgaatgaggat
gtgattgagaagattatttctgatggaaatggcggggagcagttcatggctaaggcaatt
caggaacatggaaggggaaaagtgctggagacggtggttgagatacaggacaggcatgat
gcagcgaaagagatagagaagagtttgttggagttgcaccaggtgttcttggatatggca
gtgatggtggaggcacaaggagaacaaatggatgacattgagcaccatgtgatgaatgca
gcgcagtatgttactgatggatccaagaaccttaagactgcaaaggggtaccagaagagc
agcaggaggtgcatgtgcattggaattatattgctgttgattctcattctagtcattgtg
ctcccaattgcaaccagctttagtaaatcctaa
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