Daucus carota (carrot): 108194272
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Entry
108194272 CDS
T05350
Name
(RefSeq) heparanase-like protein 2
KO
K07964
heparanase [EC:
3.2.1.166
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00531
Glycosaminoglycan degradation
dcr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
108194272
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
dcr00536
]
108194272
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.166 heparanase
108194272
Glycosaminoglycan binding proteins [BR:
dcr00536
]
Heparan sulfate / Heparin
Enzymes
108194272
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_79n
Motif
Other DBs
NCBI-GeneID:
108194272
NCBI-ProteinID:
XP_063937829
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All DBs
Position
7:5451681..5454200
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AA seq
520 aa
AA seq
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MSSMKTFALCVFFTWASFCMSERVELNIRSVTSVAKTDEDFICATIDLWPSTKCDYNQCP
WPKVGLLELDLKNKVFANAIKAFDPLRIRIGGSLEDQTVYKIGLVTKCPHFKNKMNVRRF
GFSNGCITMERWDELNHLFNETGAKVTFSLNALRGRKLEKKNSTLWVGDWNKINAQEFMK
YTISKGYKIDSYELGNELSASGVSAKVKARQYGKDMIVLSNLVKRLYANSSYQPKLLGPA
GFYDQDWFNEFLQVSGPGIVHGLTHHIYNLGPGVDANLINKVQDPYFLDEIAQTFKDVSE
SVKLYGPWSGAWVGESGGAYNSGGKHVSNTFANGFWYLDQLGMSSTFDHKVYCRQALIGG
NYGLLNTTTFAPNPDYYGALLWHRLMGTRVLQVSHDGSPYLRSYAHCSKHSKRGDITVLL
INMSNSTTFIVNTRNDLNLYPSERTVRLPPREEYHLTPEDGNIQSEVVLLNDTPLKLTKS
MDIPNLNPAFASPLDPIKVAPDSFVFAVLRGFDAPACSSS
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgagttccatgaagacatttgcattgtgtgttttcttcacatgggctagcttttgtatg
agtgagagagtggaacttaacataagaagtgttacatctgtagcaaaaactgatgaagat
tttatctgtgcaactattgatttatggccttcaaccaagtgtgattacaatcagtgtcca
tggcctaaagttggccttcttgagttggatttgaagaataaggtttttgctaatgccatc
aaagcattcgaccccttgagaataagaattggagggtcactggaagatcagactgtttac
aagattggattggtcaccaaatgtccgcatttcaaaaacaagatgaatgtgagacgtttt
ggattttccaacggttgcatcaccatggaaagatgggatgagctcaaccacttgttcaac
gaaactggggctaaagtgacgttcagtctgaatgctcttcgtggaaggaaattagaaaag
aagaacagcacactttgggtaggtgattggaacaaaataaatgcccaggaattcatgaag
tacaccatctccaaaggttacaagattgattcgtatgaacttggaaatgagctatctgca
tctggggtttctgcaaaggttaaggctcgacaatatggaaaagacatgattgttcttagc
aaccttgtaaaaaggctgtatgccaactcttcttatcagccaaagctattgggtcctgct
ggcttctacgatcaggactggttcaatgaattcctccaggtttcgggaccaggaattgtt
catggtttaactcaccatatctacaatcttggtccaggtgttgatgcaaaccttataaat
aaagttcaagacccctatttcctagacgaaatagcacaaacattcaaagatgtttcggaa
tcagttaagctatatgggccatggagtggcgcatgggttggggaatctggaggtgcttac
aatagcggtggcaaacatgtctccaatacctttgctaatggtttttggtatttggatcag
ctgggaatgtcctccactttcgatcataaggtgtactgcagacaagctttgatcggagga
aactatggtcttcttaatacaactacatttgcccctaaccccgattactatggcgcgttg
ttgtggcatcgcctcatgggaactagagttcttcaagttagtcatgatggatctccttat
ctacgttcatacgcgcattgttccaaacattctaaaagaggtgacataacggtgcttctg
ataaatatgtcaaactctaccacttttatagtaaatactaggaatgatctaaatctttac
ccaagtgaacgtaccgtgaggctcccaccaagagaagagtaccatctgacaccagaagac
ggcaacattcaaagcgaagtagtgttattgaacgatacaccattgaagcttacaaagtcg
atggatatcccaaatctgaacccagcatttgcttctccacttgatcctatcaaagttgca
cctgattcttttgtctttgcagtcctaagaggttttgacgctcctgcttgttcttcttca
taa
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