Daucus carota (carrot): 108194298
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Entry
108194298 CDS
T05350
Name
(RefSeq) heat shock cognate 70 kDa protein 2
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
dcr04141
Protein processing in endoplasmic reticulum
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108194298
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108194298
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108194298
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108194298
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108194298
03009 Ribosome biogenesis [BR:
dcr03009
]
108194298
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108194298
04131 Membrane trafficking [BR:
dcr04131
]
108194298
03051 Proteasome [BR:
dcr03051
]
108194298
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108194298
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108194298
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108194298
Spliceosome [BR:
dcr03041
]
Complex B
Other components
Prp19 complex
108194298
Complex C
Prp19-CDC5 complex
108194298
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108194298
Chaperones and folding catalysts [BR:
dcr03110
]
Heat shock proteins
HSP70 / DNAK
108194298
Membrane trafficking [BR:
dcr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108194298
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108194298
Proteasome [BR:
dcr03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108194298
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108194298
Exosome [BR:
dcr04147
]
Exosomal proteins
Proteins found in most exosomes
108194298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
DUF787
DDR
ParM_N
FGGY_C
IL5
XRCC4
Motif
Other DBs
NCBI-GeneID:
108194298
NCBI-ProteinID:
XP_017216736
UniProt:
A0AAF0XKF6
LinkDB
All DBs
Position
7:12543438..12546344
Genome browser
AA seq
642 aa
AA seq
DB search
MEKNGGIAIGIDLGTKYSCVGVWQHDQVEIIPNEHGNRTTPSCVAFTHSDHLIGDAAVDQ
AALNPLNTIFDSKRLMGRRYSDPSVQSDISLWPFKVVSGPNEKPMIVITYKGEAKQFTAE
EIMSMVLRKMKEMAEAYLGTAVKNAVVTVTTFSNSFQRQATKDAADIAGLNVLRFINEPT
AAAIAYGLDKKATIVGEKNVLIYDLGGGTLDVSLLTIEENIFEVKATAGDTHLGGEDFNN
RLVNHFVQEFKRKCKKDLTRNARSLRRLRTYCESAKRTLSYTVKTAIEIDYLYEGIDFCT
SITRTRFEELNMDLFRKCMEPVEKCLRIAKMDKGTIHDVVLVGGSTRIPKIQQLLQEFFN
GKELCKSINPDESVAYGAAVQAAILSGEANEKVQDLLLLDVTPLSLGMETAGGVMTVIVP
RNTRIPTKKELFLPKREDNEPAGLIQVFEGERTRTRDNIMLGKFELSTISHSSRGVPEIT
VCFDIDEKGVLDVSVVEKTTGQTKKITLNNKGRFSSKDIEKLVQEAEMYKAEDEEQKKKV
GEKRIRAKNALENFAYGMKKTIRDVKMKVYNAVEQSVQWLDGNQSAQAEEFEYKLKELKE
KCNFIIAKTYGPGAAPNMAGGKDKYNSSACASGEGFKIEEVD
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaaatggtggaatagcaatcggaatcgatctaggcacaaaatactcttgcgtt
ggtgtttggcaacatgatcaggttgaaatcattccaaacgagcatggcaacagaactaca
ccatcttgtgttgctttcacccattccgatcatcttataggcgatgctgctgtagatcaa
gctgctcttaatcccttaaatactatctttgattctaaaaggctgatgggtaggaggtat
agtgatccttcagtacaaagtgacattagcctttggccatttaaagttgtttcgggtcct
aatgaaaagccaatgattgtgattacctataaaggtgaggcaaaacagtttactgcagag
gagatcatgtctatggttctcagaaaaatgaaggaaatggctgaggcctaccttggtact
gcagtaaagaatgctgttgtcactgtcacgactttttctaacagcttccagcggcaagct
acaaaagatgctgcagacattgctggccttaatgttctgcgttttatcaatgagcctaca
gctgctgccattgcttatggccttgacaagaaggctaccatagtaggggagaagaatgtg
ctcatctacgatctcggtggtggtactttggatgtttctctactaacaattgaagagaat
atatttgaggtgaaggctacagctggtgacactcacctgggaggagaggactttaacaat
cgtcttgtaaatcactttgtgcaggagtttaagaggaagtgcaaaaaggacttaaccaga
aatgcgagatctcttaggaggttacggacttactgtgaaagtgcaaagagaaccctctct
tatactgtcaagacggcaattgaaattgattatttgtatgaaggtattgatttctgcaca
agtattactcgtactagatttgaagaacttaatatggatttgttcaggaaatgcatggag
cctgtggagaagtgtttaaggattgccaagatggataagggcacaatacatgatgttgtc
cttgtgggtgggtctacgagaatcccaaagatccagcagctattgcaggaattcttcaat
ggaaaggagctctgcaaaagcataaatcctgatgaatctgttgcttatggtgctgctgtt
caagctgctatcttgagtggcgaagctaatgaaaaagttcaggacctattactgttggat
gttactcctttgtcccttgggatggagacggctgggggagtaatgactgtcatagtccct
cgaaacacacgtatccctacaaagaaagaactatttctcccgaaacgtgaggataacgag
cctgcagggttgatccaagtatttgaaggtgagagaacaaggacaagggataacattatg
ctgggaaaatttgaactctctactatatctcattcctcaaggggtgtaccagagattact
gtctgctttgatatcgatgagaaaggtgtgttggacgtttctgttgtggaaaagactact
ggacagacaaagaaaataacattaaataataagggaagattttctagtaaagacatagaa
aaattagtccaagaagctgagatgtacaaagctgaggacgaggagcaaaagaaaaaggtt
ggagagaaaaggattagggcgaagaatgcattggagaactttgcatatggcatgaaaaaa
acaatcagggatgttaagatgaaggtgtacaatgcagttgaacagtcagttcagtggttg
gatggaaaccagtctgcgcaagcagaggagtttgagtacaaactgaaggaactgaaggag
aaatgcaattttatcattgccaagacatatggtcctggtgcggctcctaatatggcaggt
ggcaaggataagtataactcgtctgcttgtgcaagtggtgaaggtttcaagatcgaggaa
gttgattaa
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