Daucus carota (carrot): 108194331
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Entry
108194331 CDS
T05350
Name
(RefSeq) E4 SUMO-protein ligase PIAL2 isoform X1
KO
K04706
E3 SUMO-protein ligase PIAS1 [EC:2.3.2.-]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108194331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108194331
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
dcr04812
]
108194331
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
108194331
Cytoskeleton proteins [BR:
dcr04812
]
Eukaryotic cytoskeleton proteins
Septins
Septin associated proteins
108194331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-MIZ
zf-Nse
Motif
Other DBs
NCBI-GeneID:
108194331
NCBI-ProteinID:
XP_017216772
LinkDB
All DBs
Position
7:complement(29944671..29954883)
Genome browser
AA seq
694 aa
AA seq
DB search
MEAPRRSSGKNSVSSQLIGAAVDLLALYNNSGKLNDPRLLSKLCITMTRGIDHAIANNEV
PIKSRELPTLLQKINVWKHDLSVVIPFMLLMMSVKNACQNGWFQKKETDDLLALANEVKR
FFSTDDVLQGPCHALPSISQILSRYYPRLKIENTLCFTEVKPGYRTIVADFNLSRGVVAS
MREMIGMIVVRVDAIDTSSCIITPQEVDILLNGKGVLGRNNTSMEPVPLVPTDVTAMLKY
GVNLLQAIGNFNGPYIIAIAVMCVIPTSGTPQLQDYVQPVVASGDTASTDMEMALQTSLN
CPISKNRMRTPIKGHLCKHMQCFDYDSYLSINSRRPCWRCPLCDEPVSCIDIRIDQNIAK
VLREVEEDTDHVLVSKDGSWKVVSEIIDPSFGSASKTPEFREEKQNQSNPIGKNLSRDEN
YSQQISPTTNVEPSRVSMHQNTSNSSSLAANCTNLNDQGKKNSRVTGTNSNGMSIAMSPI
IDCRGCHSLQKDTELRKQSSWSCINTSSSANPLSVQGSVSQVNSLPVQNSNAYILPTVEQ
NGYCQNSRDTHTYQNSKNSSNNVCEAVHVQQVHSQRDDEIQASLNTHNRQPSVLDTCSKQ
SRPESEQKQNMHREKNQVSHEGGLVELPSEGWRPSGRMRGSLQGQAYAEAYRRFIKQPTQ
PVGASELPSRLMATLSVAKSQRPNIKASAQATNQ
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggaagctccgagaagaagctccggtaagaatagcgtgtcgtcgcagctaattggggcc
gccgttgatcttttagcattgtataataactccggtaaactcaatgatcctcgtcttctc
agcaagctttgcattactatgaccagaggtattgatcatgcaattgccaacaatgaagtt
cctattaaatcacgtgaattgcctacattattgcagaagattaatgtatggaagcatgac
ctatctgttgtaataccttttatgctgctcatgatgtctgtcaagaatgcttgtcaaaat
ggatggttccagaagaaagagaccgacgatcttcttgcattggccaatgaggtcaaacga
ttcttctccaccgatgatgtgttacaaggaccatgtcatgctcttccctctatttcccag
attttgtctagatattatccgaggttaaagattgagaatacactctgtttcactgaggtt
aagcctggatatagaaccattgtggcagacttcaacttatcacgtggtgtggtggcttcc
atgcgtgaaatgataggaatgattgtagtccgggtagatgctatagatacatcatcatgc
attatcactccgcaggaagtggacattttgcttaatggaaaaggtgttctaggaaggaac
aacacttccatggaacctgtacctctggttccaacagatgtgactgcaatgctcaaatat
ggagtcaatcttctacaggctattggaaattttaatggcccttatattattgccattgcc
gttatgtgtgtgataccaacttctggcactccccagttgcaagattatgttcagcctgtt
gttgcttctggcgacacagcaagtacagatatggagatggcattacaaacatcactaaat
tgccccataagcaaaaatcggatgagaactcctattaaagggcatctctgcaaacatatg
cagtgctttgactatgacagttacttgagtattaattcaagaaggccttgctggcggtgc
cctctttgtgacgagccagtgtcctgtatagacatacgcattgatcagaatattgccaag
gtcctgagggaggtggaagaggatactgatcatgtacttgtatctaaagatggatcctgg
aaggttgtatctgagatcatcgatccatcttttgggtcagctagcaagaccccggaattt
cgagaggagaagcagaatcaaagcaaccctataggaaagaatctatccagagacgaaaat
tatagtcaacaaatttctcctaccacaaatgttgagccctctagagtcagtatgcaccaa
aatactagtaactctagtagcttggcagctaactgtacaaatttgaatgaccagggcaaa
aaaaattcaagagtcacgggcaccaactccaatggcatgtctattgctatgtctccaatt
attgattgtagaggatgccattcacttcaaaaggacacagagctaaggaaacaatcttct
tggtcttgtatcaacacttcgagctcggctaaccctttatcggtgcaaggttcagtgagc
caggtaaacagcctgcctgtgcagaactcaaatgcttacattcttcccacagttgagcaa
aatggatactgccagaattctcgagatacacatacatatcaaaattcgaagaactctagt
aacaatgtttgtgaagctgttcatgttcagcaggtacattctcaaagagatgatgagatt
caagcttcacttaacacccataatagacaaccatcagttttagacacctgcagtaagcag
tcgagaccagaaagtgagcagaaacagaatatgcacagagaaaagaaccaagtatctcat
gaaggcgggttggtggaacttccatccgagggatggaggccttctggaaggatgagagga
agcctccagggtcaggcttatgcagaggcatatcgccggttcattaagcaaccaactcaa
cctgttggagcttctgaactaccttccaggttaatggcaactctgtctgttgctaaaagc
cagcgtccaaatataaaagcttctgcgcaagcaacaaatcagtga
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