KEGG   Daucus carota (carrot): 108194378
Entry
108194378         CDS       T05350                                 
Name
(RefSeq) uncharacterized protein LOC108194378
  KO
K14721  DNA-directed RNA polymerase III subunit RPC5
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    108194378
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:dcr03021]
    108194378
Transcription machinery [BR:dcr03021]
 Eukaryotic type
  RNA polymerase III system
   RNA polymerase III
    Pol III specific subunits
     108194378
SSDB
Motif
Pfam: RPC5 DUF2067
Other DBs
NCBI-GeneID: 108194378
NCBI-ProteinID: XP_017216817
LinkDB
Position
7:705169..707067
AA seq 632 aa
MDIDLDDLDAPNQGPSRRARFAPKNSKFKPKPKAEQSNSDSILPVKQESKSDSIAIVKAE
IEDVVKIDDELKLDPMLLDTTEYPIKEDLISVGEDPMELDCVGGEDDVVREIDVYFAPSV
DVNSKLYVMQYPLKPCWRPYELDDQCEEVRVKPDSSQIEIDLAVDVDSKNYDSSSGVRMS
KQVLASSGNLPCRSGYAVGVLVGNKLYLNPVNGAVQLRPSLKHMNDGEEKKVARKVKSEN
VEDLGEKDDWIRLKYNGSKSDASRQYLHKMMVEERDEIRFLMSTGEYVDSFCPRMLNKKT
GPTRSELLKLPLEDRIKTWICETGPVHRYNVLKYLAAGDSEEDVLVLVKKLCCLVQGLWV
PKSSLLKLEGVEALVRDYALYLFSKNQKINFGDIPKKMKLKSAMEDVLKVFAIRRPDLKD
WKFKEPQDVSFVRKHPDIVDEQDKAWEVRGEKLYIQIYGKDPPKMDMTAKVVPKLNANKK
VAEASPQTLPVKSVISDKAREVLLKAIEKLLHTHKVCNFQRLGQLLRDTSLEVPPPPERE
LREIIKEVAIDIHGVFVSKTSPDHSYEGLRRTVIDLLIVEGPNAKLRKAAIIEAGKIRLK
RADIPTVEYNKVMQELCVSRGSVWTLKSGDGD
NT seq 1899 nt   +upstreamnt  +downstreamnt
atggacatcgatttggacgatctcgacgctccaaatcaaggtccttcacgacgcgccagg
tttgctccgaagaactctaagttcaaaccaaaacctaaagcagaacaatccaactcagat
tcaattctacctgttaaacaggaatcaaagtctgattccatcgctatcgtaaaggctgaa
atcgaagacgttgtgaaaattgatgatgaattaaaacttgacccgatgttactagacacc
acggagtatccgattaaggaggatttgattagtgttggtgaagatccgatggagctggat
tgtgttgggggggaagatgatgttgttagagagattgatgtgtattttgcaccttctgtg
gatgttaattcgaagttgtatgttatgcagtatccgttgaagccgtgttggcgtccgtat
gaattggatgatcaatgtgaggaggtgagggtgaagccggattcatcgcagattgagatt
gatttggcggttgatgttgattcgaagaattatgattcgagtagtggagtgaggatgagt
aagcaggtgttggcgtcttcggggaatttgccttgtaggagtggttatgctgttggagtt
ttggttgggaataagttgtatttgaatccggtgaatggagctgtgcagcttcgtccgtcg
ttgaagcatatgaatgacggagaggagaagaaggtagcgaggaaagttaagagtgagaat
gtggaggatttaggggagaaagatgattggattcgtctcaagtataatggctcgaagagt
gatgcttcgaggcagtatttacacaaaatgatggtggaggagcgtgatgagattaggttt
ttaatgagtacgggtgaatatgttgattcgttttgtccgcgtatgctaaataaaaaaacc
ggtcctacaagaagcgagttgcttaagttgcctcttgaggatcgtattaagacttggata
tgtgagaccggaccggttcatcgatataatgtacttaagtatttagctgcgggtgattct
gaagaagatgttttagtacttgttaagaagctttgttgtttagttcaaggactatgggtt
ccgaagagttcgttgttgaaattggaaggagttgaagcattagttagggattatgcattg
tatctgtttagcaagaatcagaagattaattttggtgatataccaaaaaagatgaaattg
aaaagtgcaatggaagatgtgcttaaagtttttgctatacggagacctgatttgaaagat
tggaagttcaaggaaccccaagatgtgtcctttgtgcgaaaacatccggatattgttgat
gaacaagataaagcttgggaagtgagaggtgaaaagttatacattcaaatatatggaaaa
gatcctccaaaaatggatatgactgctaaggttgttccgaaattgaatgctaataaaaaa
gtggcagaggcttcaccccaaacactgcctgttaagtctgttatatcggataaggctcgt
gaagttttattgaaggcgattgagaaacttttgcacactcacaaagtttgcaactttcag
aggctaggccaacttttacgggatactagtcttgaagttcccccacctccagaacgtgaa
ctgcgggaaattattaaggaagttgctatagatattcatggtgtgtttgtttcaaagaca
tcgcccgatcactcatatgaaggattgaggaggactgttattgaccttcttattgttgaa
ggaccaaatgcaaagcttagaaaagctgctatcattgaagctggcaaaataaggcttaag
agggcagatatacctacagttgaatacaataaggttatgcaggagttgtgtgtctcgcga
ggctctgtttggacgctgaaaagtggtgatggagattaa

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