KEGG   Daucus carota (carrot): 108195311
Entry
108195311         CDS       T05350                                 
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
  KO
K10663  E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27]
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:dcr04121]
    108195311
Enzymes [BR:dcr01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     108195311
Ubiquitin system [BR:dcr04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   ATL proteins
    108195311
SSDB
Motif
Pfam: zf-RING_2 zf-RING_11 zf-rbx1 zf-C3HC4_2 zf-C3HC4 zf-ANAPC11 zf-RING_5 zf-RING_UBOX zf-C3HC4_3 zf-RING_Vps41 DUF2561 zf_RING_Vps8_fungal
Other DBs
NCBI-GeneID: 108195311
NCBI-ProteinID: XP_017217757
UniProt: A0A164TTC7
LinkDB
Position
7:complement(26953714..26954936)
AA seq 322 aa
MSTPPPPLLPFINPNQQINLLSTTNPPPYSSPLSSSSTSTSIIIVIIIIASAIIISASLY
LLLRFLSRRFHSTATPPPIFHRPNPSFRTPKTHATSSLPLFTFNSLPAKISGGDCAVCLS
KFEPNDQLRLLPLCCHAFHAECIDTWLVSNLTCPLCRSTVHPSQSDALDKILPDRTNRSN
SFRVEIGSVSRRRSDDEVSGDAVRSYTIGSFEYVVDEEFEVPIGDARTHRRDVSDKDFTG
IEVTVPVAPGDEVATEVAGERGSWLRDYVDRIASVSSRSFRSSGRFFGGSSRRSNAVVVD
DLEANNRFGEEISELFQWLSRV
NT seq 969 nt   +upstreamnt  +downstreamnt
atgtcaacaccaccaccacctcttcttccgttcatcaacccaaatcaacaaataaacctc
ctctcaaccaccaatccaccgccatactcatcaccactctcatcatcctcaacttcaacg
tcgattatcatcgttattattatcatcgcctccgccatcatcatctccgcctctctctac
ctcctcctccgcttcctctctcgtcgcttccactccaccgccactcctcctcccatcttc
caccgcccgaaccctagcttccgcacgccgaaaacacacgcaacctcctctctccccctc
ttcactttcaactcgcttcccgccaaaatatccggcggagattgcgcggtttgtttatcg
aagttcgagcctaacgatcagctgcggttgcttccgctctgctgccacgcatttcatgcg
gagtgtattgacacgtggctcgtctccaatctgacgtgtccgttgtgcaggtccactgtt
catccttctcagagcgacgcactcgataaaatccttcctgaccgaacaaaccggagcaac
agctttcgcgttgagatcggaagcgtcagtcggcggagaagcgacgatgaagtctccggc
gatgcggtgcggtcgtatacgatcggctcgtttgagtatgttgttgatgaggagtttgag
gttccgattggagacgcgcggactcaccggagagacgtctctgacaaggactttaccgga
attgaggttacagttccggtggcgccaggagatgaagtcgcgacagaggtcgccggagag
agaggaagctggctcagagattacgtcgacagaattgcgtcggtgtcgtcgcgatcgttt
cggagctccggcaggttttttggtgggagtagtcgccggagtaacgccgttgtggttgat
gatttagaggcgaataatagatttggagaagagattagtgagttgtttcagtggctgtcg
agggtatga

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