Daucus carota (carrot): 108195311
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Entry
108195311 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase ATL4
KO
K10663
E3 ubiquitin-protein ligase ATL4 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108195311
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108195311
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
108195311
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-RING_Vps41
DUF2561
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
108195311
NCBI-ProteinID:
XP_017217757
UniProt:
A0A164TTC7
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All DBs
Position
7:complement(26953714..26954936)
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AA seq
322 aa
AA seq
DB search
MSTPPPPLLPFINPNQQINLLSTTNPPPYSSPLSSSSTSTSIIIVIIIIASAIIISASLY
LLLRFLSRRFHSTATPPPIFHRPNPSFRTPKTHATSSLPLFTFNSLPAKISGGDCAVCLS
KFEPNDQLRLLPLCCHAFHAECIDTWLVSNLTCPLCRSTVHPSQSDALDKILPDRTNRSN
SFRVEIGSVSRRRSDDEVSGDAVRSYTIGSFEYVVDEEFEVPIGDARTHRRDVSDKDFTG
IEVTVPVAPGDEVATEVAGERGSWLRDYVDRIASVSSRSFRSSGRFFGGSSRRSNAVVVD
DLEANNRFGEEISELFQWLSRV
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacaccaccaccacctcttcttccgttcatcaacccaaatcaacaaataaacctc
ctctcaaccaccaatccaccgccatactcatcaccactctcatcatcctcaacttcaacg
tcgattatcatcgttattattatcatcgcctccgccatcatcatctccgcctctctctac
ctcctcctccgcttcctctctcgtcgcttccactccaccgccactcctcctcccatcttc
caccgcccgaaccctagcttccgcacgccgaaaacacacgcaacctcctctctccccctc
ttcactttcaactcgcttcccgccaaaatatccggcggagattgcgcggtttgtttatcg
aagttcgagcctaacgatcagctgcggttgcttccgctctgctgccacgcatttcatgcg
gagtgtattgacacgtggctcgtctccaatctgacgtgtccgttgtgcaggtccactgtt
catccttctcagagcgacgcactcgataaaatccttcctgaccgaacaaaccggagcaac
agctttcgcgttgagatcggaagcgtcagtcggcggagaagcgacgatgaagtctccggc
gatgcggtgcggtcgtatacgatcggctcgtttgagtatgttgttgatgaggagtttgag
gttccgattggagacgcgcggactcaccggagagacgtctctgacaaggactttaccgga
attgaggttacagttccggtggcgccaggagatgaagtcgcgacagaggtcgccggagag
agaggaagctggctcagagattacgtcgacagaattgcgtcggtgtcgtcgcgatcgttt
cggagctccggcaggttttttggtgggagtagtcgccggagtaacgccgttgtggttgat
gatttagaggcgaataatagatttggagaagagattagtgagttgtttcagtggctgtcg
agggtatga
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integrated database retrieval system