Daucus carota (carrot): 108195395
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Entry
108195395 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108195395
KO
K10756
replication factor C subunit 3/5
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03030
DNA replication
dcr03410
Base excision repair
dcr03420
Nucleotide excision repair
dcr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
108195395
03410 Base excision repair
108195395
03420 Nucleotide excision repair
108195395
03430 Mismatch repair
108195395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
dcr03032
]
108195395
03036 Chromosome and associated proteins [BR:
dcr03036
]
108195395
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108195395
DNA replication proteins [BR:
dcr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
108195395
DNA Replication Termination Factors
ELG1-RFC complex
108195395
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
108195395
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
108195395
Check point factors
HRAD17(Rad24)-RFC complex
108195395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
AAA_lid_RFC1
AAA_16
VacA
FAM199X
AAA_5
TIP49
DUF4931_C
Motif
Other DBs
NCBI-GeneID:
108195395
NCBI-ProteinID:
XP_017217842
UniProt:
A0A164UH42
LinkDB
All DBs
Position
7:37645138..37662492
Genome browser
AA seq
815 aa
AA seq
DB search
MENPKRLSRTNSKAARSGYEPSDTETEWQEETPGDDHDKVNGDEDFQVSNGADQARNFSS
LRLGRLTAKFEQEVSSPAKSSKASQGLRRHSKSPYKQRDEGNALPLPPARRTISPMLSRP
GSELRKNVSPFARTEVRNNVSPFARTEVRRTASPFAKTDIRKNVSPFAKTEIRNNSPFAK
TEHRRHLSPFKLLRENQGFRTDSMGSLNRTQAHREANDHNGRGTDKGNYSHRSASAPRPR
EKDQHIKYNHAEQKKHGRTPSPLARNPSLKEKEASNKNTPSVGEINEILANVQISKGLVG
NAPILDSTDSISPGDIFFSREYGAVTMQKVIFPKNGGFEDGLSPKHQRPAEKMHSPRQRN
NTNGSSNLNFQRNSSSNGLTRTSSSSVTSSGVSRQSSNMSDTSERTNGTAMKFAVNRKKK
QTDTWFPCISGSCRSKKPPQGKRAFDEASFIEKAFVVESLRQFWADKHQPASLNGFTCRK
HEAQLLKKLVDQDICPHILLKGPPGSGKKALTMAYLREIYGDPASNITHERRYFQVQEAR
SMQVSVPVTSSAHHVELNVHKEPNAKYALMALIKQISSNHSVTPEISTVNFKADYTVMVL
YDVDKAAENIQHLIKWIMDCYTDVCKLVLCCEDDFDILDSVKTRCKIIKVDAPVTHEIME
VLLQIALKEGFEISMSFAAKISTKAKQNLRRAIMALEACKAHNYPFAEDQPIPMGWEEVV
VDLAAEILADPTPNRLLNVRGKLQRLLVDFVHPKLILQKLIEEFLKVVGAKLKRELYYWH
GYYDKRLPIGTTAVLKLEEFVAKFMSIHRKSSSNN
NT seq
2448 nt
NT seq
+upstream
nt +downstream
nt
atggagaatccgaaaagattaagcagaacaaactcaaaggcagcgcggagtggttatgag
ccctctgacacggagactgaatggcaggaggagacccctggggatgatcatgacaaggtg
aatggggatgaagattttcaggtttcgaatggtgctgatcaagcaaggaattttagttct
ctgagactcgggaggcttactgcgaagtttgaacaggaggtttcttctcctgctaagtct
tcgaaagcaagccaggggctaagaaggcacagcaaatctccttacaagcagagagatgag
ggtaatgcgcttcctcttcctcctgctcgtaggactattagtcctatgttgtccagacct
ggttctgaacttcgtaagaatgtgagtccctttgcaagaactgaagttcgtaacaatgtg
agtccctttgcaagaactgaagttcgtagaactgcaagcccctttgcaaaaactgacatt
cgtaagaatgttagcccctttgcaaaaactgagattcgtaacaatagtccctttgcaaaa
actgagcacaggaggcatctttctccttttaagcttctgagagagaatcagggctttagg
actgattcaatgggaagtttaaatagaacgcaagcccacagagaggctaatgaccacaat
ggcaggggaactgataagggtaactacagccatagatcagcctctgctccgagaccgcga
gagaaagatcagcatatcaaatacaatcatgcagagcagaagaaacatggcaggacaccc
tccccgttagcaagaaatccatcgctaaaagaaaaggaggcgagcaataaaaatactccc
tctgtcggtgaaattaatgaaattctggcaaatgtacagatctcgaaaggcctggttggt
aatgctccaattttggatagcacagactccatttcgccaggtgatatattcttctctcgt
gaatatggagctgtgacaatgcaaaaggtgatcttcccgaagaatggtggctttgaagac
ggcctcagcccgaaacatcagaggcctgcagaaaagatgcatagtcctcgtcaacgtaac
aacacaaatggaagctctaatctgaactttcagaggaactcatctagcaatggtttaaca
cggactagttcctcctcagttacgagttctggtgtaagcagacagagtagtaatatgagc
gatactagtgaaaggacgaatggtactgcaatgaaatttgcagttaacaggaaaaagaaa
cagacagacacatggtttccttgtatttcaggatcttgtcggtcaaagaaaccaccacaa
ggaaagagagcctttgatgaagcctcgtttattgaaaaggcttttgttgtcgaaagccta
agacagttctgggctgataagcaccagcctgcatctttaaacggattcacctgtcgcaag
catgaagctcagcttctcaagaaacttgtagatcaggatatctgtccacatattcttctc
aagggtccaccaggctccggaaagaaagcactgacaatggcctatctgcgcgagatctat
ggagatcctgccagtaatataacacacgagagaagatatttccaggttcaggaagcaagg
tcaatgcaagtttctgttcctgtaacctccagtgctcatcatgtggagctcaatgtgcac
aaggaacctaatgctaaatatgcattaatggccttgatcaaacaaataagtagcaaccac
tcagtcacccctgagatcagcactgttaattttaaggcagattatacagtcatggttctt
tatgatgttgacaaagctgcggagaacattcagcacctgataaaatggatcatggattgt
tatactgatgtttgtaaactggttctctgttgtgaagatgattttgacatacttgactct
gtgaaaacccgctgcaaaatcatcaaggttgatgctccagtaactcatgaaatcatggaa
gttcttcttcagatagcattgaaggaaggctttgaaatatcaatgagctttgcggctaag
atttctacaaaagctaaacagaacttgaggagagcaataatggcccttgaagcatgcaag
gcacataactatcctttcgctgaagatcagccaattcctatgggatgggaggaggtcgta
gtggaccttgccgcagaaattttggctgatccaactcctaatagattgttaaatgtacgc
ggaaagcttcagagattattggtggattttgttcacccaaaattaattttacagaaactt
attgaagagttcctcaaggtagttggagctaaattgaaacgagaactatattattggcat
ggttattatgacaagagactaccaataggaaccactgcagtgctaaaattagaagaattt
gtggccaagttcatgagcatacacaggaagagttcttctaacaattag
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