Daucus carota (carrot): 108195404
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Entry
108195404 CDS
T05350
Name
(RefSeq) phytoene synthase 2, chloroplastic
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00906
Carotenoid biosynthesis
dcr01100
Metabolic pathways
dcr01110
Biosynthesis of secondary metabolites
Module
dcr_M00097
beta-Carotene biosynthesis, GGAP => beta-carotene
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
108195404
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
dcr01006
]
108195404
Enzymes [BR:
dcr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
108195404
Prenyltransferases [BR:
dcr01006
]
Terpene biosynthesis
Squalene/phytoene synthase
108195404
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
HTH_25
Motif
Other DBs
NCBI-GeneID:
108195404
NCBI-ProteinID:
XP_017217851
UniProt:
A0A161Y4P7
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Position
7:14914549..14916820
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AA seq
385 aa
AA seq
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MSSTYYVAPKVCLRDQSNGKVVTFWNGIRAEATVTVPTRKIATKFTELSVQSIPHSDLHI
NEIVKRQTKRSFAYQSCRKPQFDPAFLEEAYEQCKNLCSEYAKTFYLGTLLMTKERQKAI
WAIYVWCRRTDELVDGPNAAYMSSSVLDRWEERLYDIFNGRPFDMLDAALSDTVQNFPLD
IKPFGDMIEGMRMDTRKTRYKNFQEIYLYCYYVAGTVGLMSVPVMGIPPESTVPAQSIYD
AALYLGIGNQLTNILRDVGEDTLRGRIYLPQDELEQFGITEEEVFSRKVSDKWREFMKMQ
ITRARYYFNQAEEGASQLDKDSRWPVWSSLMLYREILDAIEDNDFDNLTKRAYVGRTKKL
LMLPLAYTRSLSISHFMSGRTNVML
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgagctccacatattatgttgcacctaaggtttgcttgagagatcagagcaatggaaag
gttgtcacgttctggaatggtatcagagctgaggcaacagtgactgttccaactagaaaa
atcgcgacaaagttcacagagctatcggtacagagcattcctcatagtgatctgcatata
aatgagattgtgaagaggcagactaaaaggtcctttgcatatcagtcttgtcggaagcca
caatttgatcctgctttcttggaagaggcttatgagcagtgcaagaatttgtgttctgaa
tatgcaaagactttctatttagggactttgttaatgacaaaggaaagacagaaagctata
tgggcaatctatgtgtggtgcaggaggacagatgagctggtggatggtccaaacgcagca
tatatgagctcttcggttcttgatagatgggaggaaagactatatgacatcttcaatgga
agaccctttgacatgctcgatgctgcactgtccgatacagttcaaaatttccccctagac
attaagccttttggagacatgatagaaggcatgaggatggacacaagaaaaactagatac
aagaattttcaagaaatctacctttattgctactatgtggccggaacagttggcctaatg
agtgttcctgttatgggtattccacctgaatctacagttcccgcgcagagtatatatgat
gcagccttgtatttaggcattggcaatcaacttacaaacattctcagagatgttggtgaa
gatacactgagggggagaatttatcttccacaagacgaactagagcaatttggaataaca
gaggaagaagtgttttcgaggaaagtgagtgacaaatggagagaattcatgaaaatgcag
atcacaagggccagatattatttcaaccaagctgaagaaggagcatctcagctcgacaaa
gatagtcgatggccggtttggtcatctctaatgttgtacagggagattcttgatgccatt
gaagacaatgactttgataatttgacaaagagggcttatgttgggaggactaagaagctc
ttgatgctgccacttgcatacaccagatcactatccatctcccacttcatgtctgggagg
actaatgtgatgttataa
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