Daucus carota (carrot): 108195614
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Entry
108195614 CDS
T05350
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00040
Pentose and glucuronate interconversions
dcr01100
Metabolic pathways
Module
dcr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
108195614
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
108195614
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Pectate_lyase_4
Motif
Other DBs
NCBI-GeneID:
108195614
NCBI-ProteinID:
XP_017218084
UniProt:
A0A164SUG9
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Position
7:5257457..5259392
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AA seq
391 aa
AA seq
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MAKLILSCILFFTFTALFSLSNAANTINVIKYGAKPDGKTDSTQAFVKAWVAVCNSAQAV
TMYVPQGRFVIRAVEFRGPCKSKINVQIDGTIVAPGDYRALGNTGNWILFIKVNRVSVNG
GTLDARGAAFWNCRESGKNCPEGARSITFNWANDIKISGLTSINSQAAHVVINGCNNVMV
SNLRLNAPDQSPNTDGIHVQTSTGVTITGTTIKTGDDCVSIGPGTRNLWMERIQCGPGHG
VSIGSLGKDANEAGVQNITLINSAFTGSDNGLRIKSWARPTTSFVRNVVYQNIQMRNVEN
PIIIDQNYCPNNQNCPHQTSGVKITGVTYKNVQGTSASKVAVAFDCSPTQKCTGIKLQDV
KLSYQNRDARSTCKNSGGTTSGTSMPNSCLK
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atggctaagctaattctctcttgcattctgttttttacattcacagccctgttttctctc
tcaaatgcagctaatactattaatgtgatcaagtatggagccaagcctgatggcaaaact
gattctacgcaggcattcgtcaaggcttgggtggcggtatgcaactcggcccaggcggtg
acgatgtatgtcccacaagggcgttttgtcattagagcggtggagttcagaggaccatgc
aagagtaaaattaatgttcagatagatggaactatagttgctcctggtgattaccgcgca
ttaggcaataccgggaactggatattgtttattaaagttaacagagttagtgtcaatggg
ggaactcttgatgccagaggagctgcattttggaattgtagggagtctggaaagaattgt
cctgaaggagccaggtcaataaccttcaactgggcgaatgacataaaaatcagtggtctg
acatcgataaacagtcaggcggctcacgtggtgatcaatggatgcaacaatgtgatggtt
agtaatctgcggcttaatgccccggaccaaagcccaaacactgatggaattcacgtccag
acttcaacaggtgttactattaccggaactaccatcaaaacgggtgatgattgtgtgtca
attggtcctggtactagaaatttgtggatggaacggatacagtgcggccctggacacggt
gtcagcattggaagtttgggaaaagatgcgaatgaagctggtgtccagaacatcacgttg
ataaactcggcatttacaggttcagacaatggcctgcgaattaaatcatgggctaggcct
accacttcctttgtcagaaatgttgtttatcaaaatattcagatgagaaatgtggagaac
cctatcattatcgaccagaactactgccccaacaatcagaattgtcctcatcagacttct
ggggtgaagataactggagtgacgtataaaaatgttcaaggcacgtcggctagcaaagtt
gcagtggcttttgattgcagtcctacccagaagtgcacggggattaaattgcaagacgtg
aaactcagttatcagaatagagatgcacgctcaacgtgtaaaaatagtggaggaacaacc
agcggaacttcaatgccaaatagctgcttgaaatag
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