Daucus carota (carrot): 108195867
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Entry
108195867 CDS
T05350
Name
(RefSeq) U1 small nuclear ribonucleoprotein 70 kDa isoform X1
KO
K11093
U1 small nuclear ribonucleoprotein 70kDa
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108195867
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108195867
Spliceosome [BR:
dcr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
108195867
Complex B
108195867
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Paralog
GFIT
Motif
Pfam:
RRM_1
U1snRNP70_N
Motif
Other DBs
NCBI-GeneID:
108195867
NCBI-ProteinID:
XP_017218358
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All DBs
Position
7:complement(37399947..37408901)
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AA seq
482 aa
AA seq
DB search
MGDYNDAFLRNNAAGGPANVQSRVKAQARTNVLQLKLIGQSHPTGLTNNLLKLFEPRPPL
EFKPPPEKNKCPPYTGMAQYVPNFAEPSDAEYAPPVQKGETPTEKRARVHLLRLEEGAKR
AAEELEKYDPSNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKRVRLVADKEKN
KPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTVPNWRPRRLGGGLGTTRV
GGEEVNQRHSGREQNQSGGSRRSEEPKVREDRERDREKSRERGKDREREREKSREHSHER
PRDRDHREDRHHRDRERTRDRERERERDKGRDRTRDRDRKERSGRDRHRDEEKIRGRDLE
VDDIGRDRGRSRDKDYDYDRVDSKHERDRHGDREKSYGHPEPEDDPGWYKQPEQEHRRSE
AENEMAYDYYDDRNGLGKYGNPSNEDIHDRYQHSDRDHDRYDQMDEDREYHRLDRSLSRE
YK
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggagactataacgatgcgtttctgcgaaacaacgccgccggcgggccggcgaacgtg
cagagccgcgtcaaggctcaggctaggactaatgttttgcaactcaagctgattggacaa
agtcacccaactggtttaacaaacaacctgctaaagctttttgagccccggcctccattg
gagttcaaaccacctcctgagaagaataaatgtccaccatatacagggatggctcaatat
gtacccaactttgctgaaccaagtgatgctgagtatgctcctccagttcaaaagggcgaa
actcctacagaaaaaagggctagggtccacctgttacgactggaagaaggggcaaaacgg
gctgcagaggaacttgagaaatatgacccaagtaatgacccgaatatctctggagatcca
tacaagacactctttgtagctaggcttaattacgagacaactgagagcagaattaaaagg
gagtttgaggcttatggtcctatcaagcgggttcgcttggttgcagacaaggagaaaaac
aaacccagaggctatgctttcattgaatatatgcatactcgggacatgaaagctgcatat
aaacaagctgacgggaggaagcttgacaacagaagggttttggtagatgttgagcgtggt
agaactgttccaaactggagaccacgtagacttggaggtgggcttggtacaaccagggtt
ggaggtgaagaagtcaatcagaggcattctgggagagagcagaatcaatcaggtggatca
cggcggtctgaggagccaaaagtaagagaagaccgggaaagggacagggaaaagtcacgt
gaaagaggtaaggacagagaaagggaacgtgagaaatctcgtgagcactctcatgagagg
ccaagggatcgtgatcatagagaagatagacaccatagggatcgtgagaggaccagagac
agggagagggagagggagagagacaagggtcgtgatcgaacacgagatcgtgatcgtaaa
gagcgcagtggtcgtgaccgccatcgcgatgaggaaaagatcagaggtagggatcttgag
gtggatgacattggtcgtgatcgtggtcgatcccgtgataaagactatgactatgatcgt
gttgattcaaaacatgagcgtgaccgccatggtgacagagagaagagttatggtcatcca
gagcctgaggatgatcctggatggtacaaacaacctgaacaggagcatagacgttctgaa
gccgagaatgaaatggcatatgattactatgatgatcgcaatggacttggtaagtatgga
aatcccagtaatgaggatattcatgatcgataccagcattcggaccgtgatcatgataga
tatgatcaaatggatgaagaccgtgaatatcatcgattggacaggtcactttctcgagag
tacaagtaa
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