Daucus carota (carrot): 108195938
Help
Entry
108195938 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108195938
KO
K12817
pre-mRNA-splicing factor 18
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108195938
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108195938
Spliceosome [BR:
dcr03041
]
Complex C
Other components
Step II factors
108195938
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Prp18
PRP4
PolyG_pol
Motif
Other DBs
NCBI-GeneID:
108195938
NCBI-ProteinID:
XP_017218448
UniProt:
A0AAF0XM68
LinkDB
All DBs
Position
7:30690442..30695012
Genome browser
AA seq
413 aa
AA seq
DB search
MDILKEELQRQRKALAEQTGGRRIFKRSELEQKKIQQLRQEERRDAEQKQLRQNPLNPNS
NPNSSSSNPNSLSDPPKTRPDSSSSSKPLTDEEKIDILNLPKQEVIRRLRFLKQPITLFG
EDDEARLSRMKYVLKAGLFEVDDDMTEGQTNDFLRDIVELKKRQKMGNMGDRKRKVSREE
RSEDNDGGGGDDEEDLSGGDDEENDRDLKRMRSDFEELCDEDKILVFFKRLLIEWKQELQ
AMTDMEKRTAKGKSTVATFQQCARYLNPLFKFCRKKILQDDIRQALMLMVNCCKKRDYLA
AMDHYIRMAIGNAPWPIGVTMVGIHERSAREKIHTNSVAHIMNDETTRKYLQSVKRLMTF
CQRRYPTMPSKAVEFNSLANGSDLQSLLAEERGDMGSEPDEERLRLMAPPSEK
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggacatcttaaaggaagagttacaaaggcagagaaaggccttagcggagcagaccgga
ggcagacggatcttcaaacgctccgaactcgaacaaaaaaagatccaacagctccgtcaa
gaagaacgtcgcgacgctgagcaaaaacaactccgtcagaaccccctaaatcctaattcc
aaccctaattcgtcttcctctaaccctaattccctttccgacccgcccaaaacccgaccc
gactcctcctcctcttccaagccactaaccgatgaggaaaaaatcgacattcttaattta
ccgaagcaggaggtgattcgtcgattacgctttctaaaacagccgatcacgttgtttgga
gaagacgatgaggcgaggctgagccggatgaagtatgtgttgaaggcggggttgtttgag
gtggatgatgatatgacggaggggcagacgaatgattttttacgagatattgttgagttg
aagaagcggcagaagatggggaatatgggggataggaagaggaaagtgtcgagggaggag
cggagtgaggataatgacggtggaggcggggatgatgaggaggatttgagtggtggtgat
gatgaggagaatgatcgggatttgaagaggatgaggagtgattttgaggagctgtgtgat
gaggataagattcttgtgttttttaagaggttgttgattgagtggaaacaggagttgcag
gcaatgacggatatggagaagaggacggctaaagggaagagtacggttgctacgtttcag
cagtgtgcgcggtatttgaatccgttgtttaagttctgtaggaagaagattcttcaggat
gatattcggcaagcattgatgttgatggttaactgctgcaaaaagcgggactacctagct
gcaatggatcattatatcagaatggccattggtaatgcaccttggcctattggtgttact
atggttggtattcacgagcgttcagctcgtgagaagattcacaccaacagtgtagcacac
attatgaacgatgagacaacacgaaaatatctgcagtcggtaaaaagattgatgacattc
tgtcagaggcgatatcctacaatgccttctaaagcagttgagtttaacagcttggcaaat
ggcagtgatctgcaatcgctgttggctgaggagagaggcgacatgggcagtgaacctgat
gaggaaaggcttcggctgatggctcctccaagtgaaaaataa
DBGET
integrated database retrieval system
