Daucus carota (carrot): 108195993
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Entry
108195993 CDS
T05350
Name
(RefSeq) eukaryotic translation initiation factor 4G
KO
K03260
translation initiation factor 4G
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108195993
03012 Translation factors [BR:
dcr03012
]
108195993
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108195993
mRNA cycle factors
Stress granule specific factors
108195993
Translation factors [BR:
dcr03012
]
Eukaryotic type
Initiation factors
eIF-4
108195993
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
MA3
Calreticulin
FANCI_S2
Motif
Other DBs
NCBI-GeneID:
108195993
NCBI-ProteinID:
XP_017218527
LinkDB
All DBs
Position
7:27036816..27047113
Genome browser
AA seq
1765 aa
AA seq
DB search
MSVNQTRADKTQSGQYRATGRFSRSNSGGGGGHRNYASRGGGANPPSRSTSFKKGNDVQG
VQTRVTNGSVNLDSSNNAALPANAAHSQSHGGADAQAAVKPADVSSQKSTRGVPKAPVTN
APAVISSTMAPSTPVKGGGFPLQFGSISPGLMQVPARTSSAPPNLDEQKREQARYDSLRA
APVLPIQSIPKQQVSTRKYVTADQSSAVDGHSVSKARRDVQVTAGPHTIQTQKPTLHPVT
GMPMQMPFHQSQIPAQFGGLNPQLQSQSMVNSSIPVPMPIPMTMPFPMGNQGVPQQVYFQ
GVPPHMLPPHSVMHQVQGTKLTSQMGTQLPHLGNIGMNINPQFSQQPGDFGNARKTVKIT
HPDTHEELSLVKKADTSIEAGSSAARSQPSIPPPSQPIPTFPPAHPVNSNPNSYIQGSII
LKGPSSLLSSSNQIAPSLQVPKLHNQVPVMPVADQCGEKNAESLLPISLSTVEKTIPIIS
SREGEATLVPSQIDAENITGRLLQQSKSTLIPVQSRPTIGVSDSVSAVEPKTDFLSSTSP
EITEHLPSMASSTTLGTKTDASKSDDNNKKPGKKIHSLLQNQSTSGLPSSLKNEEIIKSS
PSPEAGPAQDDIRESEGTAVDLRTDSTEVQGNFDMAKIDGDDSVKISAELAMLNKAQFDD
SEENASGYVRSPKSILPRVSGNGDKTDSPVVDVKDEQQELKVPESVREGGADNVLASTSG
AVNFLITKTSLLSLGARITHDADKNLAPDASTNNNDAVGRTEALSTVSGMLGQNFPILSV
SSQSEMPCATEVANIDSDSTGLLCPSTDSRDKPMLQTNVSKNTLARGKKKRKEALQKADR
AGTTTDLYMAYKGSDEKKETLTNVESSVTTSSHAREEISSGTSHKEIPNESKAEPDDWED
AADLSTPKLESLEDQNQLGEVKHHIEDESSMTRKYSRDFLLKFSEQYKDLPDGFEITSDI
TELLTVSMGNVPREKLQIPGRNVDRSMERSRSGRRGSGMNFDEKRSKVPGPFPSGLDMGY
GNHGNNVVFQPGGNLGVLKNSRAQVPVMYSGVLSGPVQYMNQQFGMQRTNSDAERWQRTN
SFQRGLIPSPRTPSQMMHKAERKYEVGKVTDEEQAKQRQLKGILNKLTPQNFERLFEQVK
QVNIDNAGTLTGVISQIFDKALMEPTFCEMYANFCYYLAGELPDFIEDNEKVTFKRLLLN
KCQEEFERGEREQEEANRADEEGETKQSDEEREEKRIQARRRMLGNIRLIGELYKKKMLT
ERIMHECIKKLLGQYQNPDEEDIEALCKLMSTIGEMIDHPKAKEHIDAYFDMMAKLSNNM
KLSSRVRFMLKDSIDLRKNRWQQRRKVEGPKKIEEVHRDAANERQAQANRLARTSSMNSS
SRRVQQPTDFAPRGSNGLLSPNAQFGGFRGVPQTPRGYATQDIRTDERHLFDSRIVSVPL
FQRPPGNESITLGPQGGLARGMSIRGQPSMSKIPFSDMHSSDFRGTTTSNGYGSLTDRPA
HGSREELFSRVSPDKLVSPATSGHMNLKDGNLTYRNREVQHPDQVLNRSRPSTPQTRSTE
SSSVGNIPPEKVLPKEQLRKMSMETIKEFYSAKDEKEVALCVKDLNAPSFYPSMIYLWIS
DSFERKDMERDLLAKLLINLAKPQDALLSQPQLVEGFESVLASLEDAVTDAPKAPEFLGG
IFAKVVLENVLPLAEIGRLIYEGGEEQGQLVDSGLAAKVIGRVLEIIKIEKGDAVLKQIC
TGSSLSLENFRPPNSKRPSSLDQFI
NT seq
5298 nt
NT seq
+upstream
nt +downstream
nt
atgtccgtcaatcaaactagggctgacaagactcagtctggacaatatcgagcaacaggc
cgatttagtcgcagcaactctggtggtggtggtggtcaccggaattacgcctcgagaggc
ggtggggcaaaccccccttcacgcagtacaagctttaagaaggggaatgatgtgcaagga
gtgcaaactcgggttacgaatgggagtgtgaatctggattctagtaataatgctgctctg
cctgctaatgctgcacattctcaatcacatggaggagctgatgcacaggctgctgtgaag
ccggctgatgtgtcgtctcagaaaagcaccagaggtgtgccaaaagctccagtaacgaat
gctcctgctgtcatctccagtacaatggcaccttcaacccctgtaaaaggtggaggtttt
ccgttgcagtttggatcaataagtcctggtttgatgcaggtacctgctcgaactagctca
gcacctccaaatctagatgaacagaaacgagaacaggctcgttatgattccttaagagcg
gcacctgttctgccaatccaatccattcctaagcaacaagtttctacacgtaagtatgtc
acagctgaccaatctagtgctgttgatgggcattcggtgtccaaagcaagaagagatgtg
caagttactgctggtccacataccattcaaactcaaaagcctaccttacaccctgttact
gggatgcctatgcaaatgccatttcaccagtcacaaattccagctcaatttggtggtctt
aatccacaactgcagtcacaaagcatggtgaatagttctattccggttcccatgcccata
cccatgacaatgcccttccctatgggaaatcaaggagtgccacaacaagtttattttcaa
ggagtgccacctcatatgctgccacctcatagtgtcatgcatcaggtccagggtaccaaa
ttaacatcacaaatgggtacccagttgcctcatttgggcaatatcgggatgaacatcaat
cctcagttttctcaacagccaggagatttcggcaatgcacggaaaactgtcaagataact
catccagatactcatgaagagttgagtttagttaaaaaggctgatacttccatagaagct
ggatcttcggctgcgcgatcacaacccagtataccccctccatcccaacctattccaact
tttccacctgctcatccagtaaactccaaccctaattcttacattcagggttccatcatt
ttaaaaggtcctagttctcttctttcatccagtaaccaaattgctccaagtttgcaggtg
ccaaagttacataatcaggtcccggtgatgccagtggctgaccaatgtggtgagaagaat
gcagaatctttattgccaataagcttgtcaactgttgagaagactattcctattatttct
agccgagaaggagaagctaccttagttcccagtcaaatagatgctgaaaatataactgga
aggttgttacagcagtcaaagtctacattgatacctgttcaaagtaggccaactattgga
gtatctgattcagtttctgcagttgaacctaaaaccgactttctctcctctacttctcct
gaaatcaccgagcatctcccatcaatggcctccagtactactctaggcacaaagacggat
gcttccaaatccgatgataataataaaaagcccggtaaaaagattcattccttactacag
aatcagtctacatctggtttgccttcgtcactcaaaaatgaggaaatcataaaatcttct
ccttcaccagaagctgggccagcacaggatgatatcagggaatcagaagggactgctgtt
gacttgagaacagatagtaccgaggtacagggaaattttgatatggcaaaaattgatggt
gatgattctgttaagatatctgctgaacttgcaatgcttaataaagcacagtttgatgac
tctgaagaaaatgcttctggatatgtgagaagcccaaaatctattttaccaagagtgtct
ggaaatggagataaaactgatagtcctgttgtggatgtaaaagatgaacagcaggagttg
aaggtacctgaatccgtcagggaaggtggagcagataatgtattagcttctacttctggg
gcagtgaacttcttgattacaaaaacttctttgctgtctcttggagccagaatcacgcat
gatgctgataagaatttggctccagatgcctctacaaacaacaatgatgctgttggtaga
acagaagctttaagtacagtctccggtatgttgggtcagaacttccctattctttcagtt
tcgtcccaatctgaaatgccttgtgcaactgaagttgctaacattgactctgacagcact
gggttactttgtccatcaactgattccagagataagcctatgctgcagacaaatgtatct
aagaatacacttgctagagggaaaaaaaagagaaaagaagctctacaaaaggctgaccgt
gctggtacaactactgatctctatatggcatataagggttcagatgaaaagaaagagact
cttacaaatgttgagagctcagttacaacttccagccatgctagagaagagatatcttct
ggtacttctcataaagagataccaaacgagagtaaagctgaacctgatgattgggaggat
gctgcagatttatcgacgccaaaactggaaagtttagaggatcagaaccaacttggagaa
gtaaaacatcacattgaggatgaaagttcgatgaccagaaagtactccagagatttcctt
ctcaaattctcggaacagtataaagatcttcctgatggttttgagatcacttcagatatt
acagaattactgacagtgtctatgggaaatgttcctcgtgaaaagttgcagattccaggg
agaaatgttgataggtcaatggagagatctcgatcaggtcgccgtggtagtggcatgaat
tttgatgaaaaacggagcaaggtacctggaccttttccctctgggttggatatgggctat
ggaaatcatggaaataatgttgtcttccaacctggagggaatcttggtgtgttaaaaaat
tcacgtgctcaagtaccagttatgtattctggggtcctatctgggccagtgcagtatatg
aatcaacagtttggcatgcagcgaactaactctgatgctgagagatggcaacggacaaat
agttttcagaggggtcttataccttcccctcggactccttcacagatgatgcataaagct
gagcggaagtatgaggtgggtaaagtaactgatgaggaacaggcaaagcaaaggcaattg
aaaggtattttaaataagttaactcctcaaaattttgaaagactatttgagcaagtcaaa
caagtaaatattgacaatgccggtactctcactggcgtgatatctcaaatatttgataaa
gcacttatggaacctacattttgtgaaatgtatgccaatttttgctattatcttgctggc
gagttgcctgattttattgaagacaatgaaaaagttacttttaagaggttactcttaaac
aagtgccaggaggagttcgagagaggtgagagggaacaggaagaagctaacagagctgat
gaagaaggtgagactaagcagtctgacgaagaaagggaagagaagagaatccaggcacga
aggcgaatgttggggaatattagactgattggggaattgtacaagaaaaagatgttaaca
gaaagaattatgcacgaatgcataaagaaactgttgggtcagtatcaaaatcctgatgag
gaagatatagaagccttgtgcaagctaatgagcacaattggagaaatgatagatcatccc
aaagccaaggagcacatagatgcatattttgacatgatggccaagctatctaataacatg
aagctttcttctagagtgaggttcatgctgaaggattcaattgacctgaggaagaacagg
tggcaacagaggaggaaggttgaaggtccgaaaaagattgaggaagtgcacagggatgct
gctaatgaaaggcaggctcaagctaacagattggcccgcacatcgagtatgaattcatct
tctagaagggttcaacaacctacggactttgctccaagagggtcaaatggattattgtct
ccaaatgcacaattcggtggttttcgtggagtaccacaaacaccacgcggatatgctact
caggatatcaggacagatgagaggcatctttttgatagcagaatcgtctcagttccattg
tttcagaggccccctggtaatgagtctattacccttgggccgcaaggtggtcttgccagg
ggaatgtctattagaggacaaccgtctatgtcaaagatacccttctctgatatgcacagt
tcagatttcaggggaactacaaccagcaatggctacggttctttgacagaccgaccagcc
cacggttcaagagaagaacttttttcaagagtctctcctgataagcttgtcagtccagct
acttctggccatatgaatttaaaggatggaaatctgacttacaggaacagggaagtacag
catccagatcaggttttaaacagatctcgaccaagtacacctcaaaccagaagtacggag
tcgagttctgtaggaaacattcctccagagaaggtgttgcctaaagaacaactgcggaaa
atgtcaatggaaactataaaagaattctacagcgctaaagacgaaaaggaagttgccctg
tgtgtcaaagatctaaatgctcctagcttttatccgtcaatgatatacctctggatatct
gattcctttgagaggaaggacatggaaagggatctactagcaaagcttcttatcaacctt
gcaaaaccgcaggatgccttgttaagtcaacctcaactcgtggaagggtttgaatcagtt
ctagctagtttggaggatgctgtaactgatgcccctaaagcaccagaatttcttggtgga
atctttgcaaaagttgtactagaaaatgtgcttccattggcagaaatcggaaggttgatt
tatgaaggtggggaggaacaaggacagcttgtagacagcggacttgcagctaaagttatt
ggaagggtcctggagattattaaaatagaaaaaggagatgctgttttgaaacagatttgc
actggttctagtttaagtctagaaaacttccggcctccaaactctaaaagaccatcgagc
ttagatcaatttatctag
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integrated database retrieval system
