Daucus carota (carrot): 108195995
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Entry
108195995 CDS
T05350
Name
(RefSeq) sister chromatid cohesion protein SCC2
KO
K06672
cohesin loading factor subunit SCC2
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108195995
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
108195995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
PHD
Cnd1
PDS5
PHD_2
API5
INTS1_R4
zf-PHD-like
Motif
Other DBs
NCBI-GeneID:
108195995
NCBI-ProteinID:
XP_017218529
UniProt:
A0AAF0XKK4
LinkDB
All DBs
Position
7:complement(32822301..32840152)
Genome browser
AA seq
1772 aa
AA seq
DB search
MASSRRIPRGISLSNTVHSDVAPCLPLPSLPVFFGSLDQEIRLSEEANGSRSVNRRDVVN
QAEKIASLLQGTDVSYLSLKGDSSSQCYGSVGPTDLYDEVLRSNSEAFESYVPGVSGHFK
EQLYNLKIIEEPLQQDLPAANQVQRETSRTQNNHDNHDKILTSSRKQKVKKKGSDIGSGP
DASAVQDAVIGGFCAGLEDLCGRAEMNDDDREESEWLPLSLADIKVLVNDVVSIRAKNYL
HLVPVDILVRTLRVLDHQIHRAEGLSINECEHADSDVLSSVSVALESIHAALLVMANSGM
PKKLYNEEMIERILEFSKYQMMDIMSACDPAYRALHRPSENGNFEDDVEDGFDFGSASKR
RRTSKGVKVRKPAVNRVSAVVNNIDQKLCIILGLLKDLLSIERLSDSCIFQLAKTSFSTL
LVENIQLLQLKALSLICGIFYSYKQHRTYLIDELVLLLLKLPMTKRPPRHYHLPDDEQKQ
IQMVTALLLQLVHCSANLPDALRESDGTAFLLEPSIDAAYPSKCHEAVTETCCVFWTRVL
QRFTSTKSHDAAELKNMMDNLVADLLTTLNLPEYPAAAVILEVLCVLLLQNAGLKSKDIA
ARSMTIELLGTVAARLKQDAVLCRRETFWILKEFMNDDASRSYPKDACSVCLGAKNANSM
VLCQGCQRLFHVECMGIREDEISIRSWDCQFCACNKQLLALQSYCKSQCKNDGKKESSSS
EASETTTKMEIIQQMLLNYLEDAGSSVDMHLVTRWFYLCSWYKDDLSCQQKLLFFLARLK
SRALVRDSKTVSSILKRSSIKKITLAMGQNNSFSRGFDKILQMLLASLRENSPVIRAKAL
RAVSIIVEADPEVLRDQHVQSAVEGRFCDSSISVREVSLELVGRYITSHPDVGSKYFEKV
AERIKDTGVSVRKRAIKIIRDMCTANPNFSEFTNACIVIISRICDEESSIQDLVCKTFYE
FWFDDSASSQTRSFGDGSSVPIEVAKKTEQIVEMQRRMKDNQLLVTVIKRNLALDFLTQS
AKAAGINPVALASVRKRCELMCKCLLERILQVEEMTGVEVELSSLPYVLLLHAFCVVDPA
LCAPSSDPSQFVVTLEPYLKTQADSREVAQLLESIVFVIDSVLPLAPKIPQAVVEELEKD
LKQMIVRHSFLTVVHACIKCLCTVSKVAGKGARVVEYLIRVFFKRLDALGFDNKQQVGRS
LFCLGLLIRYGNSLLSTSSNRNLDVEKSVTLFKKYLTAEDFVFKIRSLQALGYVLVARPE
FMLEEGVGKILEATLSSSTDYRLKLQSLQNLYEYLLDAESQMGKDNSNDKEVAYSVEGGQ
SVPVAAGAGDTNICGGIVQLYWNSILGRCLDEIEPVRRSALKIVEAVLRQGLVHPITCVP
YLIALETDPQEVNSKLAHHLLMNMNEKYPAFFESRLGDGLQMSFIFIQSMNQSNPEKFNA
KLQSKSLGNVKGKSDASSVAYAKLGVSRIYKLIRGNRVSRNKFMSSVIRKFDNLACSSSV
IPFLMYCTEILALLPFSLLDEPLYLVYAINRVLQVRAGTLEANMKALLHLLQSSQNFVAG
NGNILPKPSAQAVSANSVSYDLNGTLSENADADFLVSSHSAPRESNLHSVSLHEAFGTSE
DVLRKLQEYCLAASALQLLMRLKRHLKVVFSLDDARCQAFSPNESQKSGDVLSRQNIPFN
ISETRLDLPSTYNDLLQRYQEFKNALREDTVDYSTYTANIKRKRPTPRKAGKSNRMIGQN
DEEAESDEEWESGGRRVNNGRRGSSVRTRQRL
NT seq
5319 nt
NT seq
+upstream
nt +downstream
nt
atggctagttcgcggcgaattccccgaggcatcagcctctccaacactgtgcactctgat
gtggctccgtgcttgccgttgccgtcgctgccggtgtttttcggctcgcttgatcaggag
attcggctttcggaggaggcgaatggttcgagatcggtgaatcggagagatgtggtgaat
caggcggagaaaattgctagtttgcttcaaggaactgatgtctcgtatttgagtctcaag
ggagactcaagctcacaatgttatggctctgttggacctacggacctctatgatgaggtt
cttcgaagcaactcggaagcattcgagtcctatgtgccaggtgtctctggtcatttcaag
gagcaactttataatcttaagataattgaagagccattacagcaggatttacctgcagct
aatcaagttcaaagagagactagcagaacacaaaataaccatgataaccacgacaagatt
ttgacttcttctaggaaacagaaagtcaaaaagaagggaagtgatattgggagtggtcct
gatgcctcagccgttcaagatgctgtaattggaggtttttgtgctgggttagaggatttg
tgtggtcgggcagaaatgaacgatgatgatcgtgaagaatctgaatggttaccattatcc
cttgctgatattaaagtacttgtgaatgatgtagtttctatccgagcaaagaactaccta
catttggttcctgtagatattcttgtgagaaccttaagggttttagatcatcagattcat
cgagcagaaggtctttcaattaatgaatgtgaacatgcagattcagatgttctatcatca
gtatctgttgctctagagtccattcacgctgctctactggtaatggctaatagtggcatg
ccgaagaagctctataatgaagagatgatagaacgaatactggagttttccaagtatcaa
atgatggatatcatgtcagcatgtgatccagcttaccgtgcgctgcacagaccaagtgaa
aatgggaactttgaagatgatgttgaagatggttttgattttggttctgcgagtaagaga
aggcgtacctcgaagggtgtaaaagtgaggaaaccagctgtgaacagagtttctgccgtt
gtgaataatatagatcagaaactgtgcattattctcggtcttctgaaagacttgttgtct
atagagcgcctttcagatagttgcatttttcaattggcaaagacaagcttctcaacgtta
ttggtggaaaatatccaattgctgcagctgaaagcactcagtttaatttgtgggatattc
tattcatacaaacaacatcgaacttatctgattgatgagttggtgctcttgctattaaag
ttgccaatgacaaagcgaccaccaagacattatcatctacctgatgatgagcagaagcag
attcaaatggtaactgctctattgcttcagttggttcattgtagtgccaaccttcctgat
gctttaagggagtctgatggcactgcgttccttctcgagccttcaattgatgccgcttac
cctagcaagtgccatgaggcagtcacagagacatgttgtgttttctggactcgagttctt
cagagatttacaagtacaaagagtcatgatgcagcagagctgaagaacatgatggataat
cttgtggctgatttattgacgacattgaatttgcctgagtatcctgctgcagctgttatt
ctggaggtgctctgtgtcctactacttcagaatgctggtttgaaatccaaggatattgct
gctcgttcgatgacgattgaactccttggtacagttgctgccaggttaaaacaggatgct
gtgctatgtaggagggaaaccttttggatcctgaaagagtttatgaatgatgatgcaagt
cggagctatccgaaagatgcatgttctgtttgcttgggtgcaaagaatgcaaattctatg
gttttatgccaaggttgtcaaagattatttcatgttgagtgcatgggaataagagaagat
gaaatttctatccgcagctgggactgtcagttttgtgcttgcaataagcaacttcttgcg
ttacaatcatactgtaaatcacagtgcaagaatgatggcaaaaaggagtctagttcttct
gaagcttctgagaccactacaaagatggagataattcagcagatgcttctgaattatctt
gaggatgctggttcttctgttgatatgcatctcgttacccgatggttttatctttgctcg
tggtacaaagatgatctgagttgccaacagaagttactcttttttcttgctcggcttaaa
tcaagagcacttgtacgcgactcgaagaccgtttcttctattttgaaaaggagttcaatt
aaaaagataactttagccatgggtcaaaacaattctttctccagaggatttgataaaatc
cttcaaatgcttctggcaagtttaagggagaactctcctgttatccgtgccaaggcatta
agagcagttagtattattgttgaagctgatccagaagttttgcgtgatcaacatgtccaa
tcggctgttgaaggaaggttctgtgattcgtctatatctgttagagaagtatctcttgaa
cttgttggtcgctatattacttcacatcctgatgttggttcaaagtattttgagaaggtt
gctgagagaataaaagatactggagtaagcgtgcggaaacgagctatcaaaattataagg
gatatgtgcactgcaaatccaaatttctcagaattcactaatgcttgcattgtaattatt
tcccgtatttgtgatgaagaatccagtattcaggatcttgtatgcaagacgttttatgag
ttctggtttgacgattctgcaagttcacagactcggtcttttggagatggtagttctgta
ccaatagaagtagctaagaagactgagcagattgtcgagatgcagcgaaggatgaaagac
aatcaacttcttgtcacagtcattaagcgtaacttggcccttgactttctaacacaatcg
gcaaaagctgccgggatcaatcccgttgctcttgcatcagtgcgtaagcgctgtgagctt
atgtgtaaatgtttgttggagagaatacttcaggtagaagaaatgacaggcgtagaagtg
gagttgagctcacttccttatgttcttttgttgcatgccttttgtgtcgtggatcctgca
ctatgtgcaccgtcttctgatccttcgcagtttgttgtcactttagagccatacttgaag
actcaggctgatagccgagaagttgcacagctattggaaagcatagtgtttgtcattgat
tctgttttacccttggctccaaagattcctcaggctgttgttgaagagcttgagaaagat
ttgaaacagatgattgtgcgacattctttcttaactgttgtccatgcttgcatcaagtgt
ctttgcacagtgagtaaagtagcaggtaaaggtgcaagagtagtcgaatatctaattcgt
gtttttttcaaaagattggatgcattagggtttgacaataaacagcaagtgggccgctca
cttttctgtctgggtttgttaattcgttatggtaactccttgctaagtacctctagcaac
agaaatctagatgttgaaaaaagtgtcaccttattcaagaagtatcttacggctgaagac
tttgtttttaaaattagatcattgcaagcattaggatatgttttagttgccaggcctgaa
ttcatgttggaggagggtgtgggaaagattttggaggcaacattgtcttccagtacagat
tatcgtcttaagttgcaatcattgcagaatctgtatgagtatcttcttgatgcggaaagt
caaatggggaaggataattccaatgacaaggaggttgcttattcagtagagggtggtcaa
agtgtgcctgttgctgctggtgcaggtgataccaacatatgtggtgggattgttcagctg
tattggaatagcatcttaggtagatgtttggatgagattgaaccagtacggagatctgct
cttaagattgtggaagctgtgctgcggcaaggtctggttcatccaatcacttgtgtacca
taccttatagcgctggaaacagaccctcaggaggttaactcgaagctggcgcatcattta
ctgatgaatatgaatgagaagtatcctgctttctttgaaagtcgacttggggatggtctt
cagatgtcatttatattcatacaatccatgaatcaaagtaaccctgagaaatttaatgct
aagcttcaatcaaaatcacttggtaatgtaaagggcaaatcagatgccagttctgtggcc
tatgcaaaattgggggtttctcgaatctacaagctcattcgtggtaatcgtgtttcaagg
aacaagtttatgtcatcagttattcgcaagtttgacaatcttgcctgcagtagttcagtg
attccattcttaatgtactgcacagaaatccttgctttacttcctttctctttgctagat
gaacctctttatttagtgtatgctattaatcgagtattacaagttagagctggaacgttg
gaggcaaatatgaaagctttgttgcatctattgcaaagtagtcagaattttgttgctgga
aacgggaatattttgccaaaaccatctgctcaagcggtttctgctaattcagtatcttat
gatttgaatgggacattatcagagaatgctgatgctgattttctggtttctagtcattca
gcacccagggaatcaaatttgcattctgtgagcttgcatgaagcctttggaacttctgaa
gatgttttacggaaacttcaggagtactgtcttgcagcttctgcattgcaactacttatg
aggctaaaaaggcacttaaaagttgtttttagtcttgatgatgctcgatgtcaggcattt
tctccaaatgaatctcagaagtcaggggatgttctctcgcggcaaaatattcccttcaac
atcagtgaaacacgtcttgatctcccaagcacgtataatgatttgttgcaaagatatcag
gaattcaaaaatgccctgagagaagacactgttgactactcgacctacacggccaatatc
aaaaggaagcgtcctacacccagaaaagctggaaaatctaatcgtatgataggccagaat
gatgaagaagctgaatctgatgaagaatgggaaagtggaggtcggagggtaaacaatggg
agacgaggaagtagcgtcagaactaggcagcgattgtag
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integrated database retrieval system
