KEGG   Daucus carota (carrot): 108196024
Entry
108196024         CDS       T05350                                 
Name
(RefSeq) protein decapping 5
  KO
K18749  protein LSM14
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108196024
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108196024
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 108196024
NCBI-ProteinID: XP_017218570
LinkDB
Position
7:complement(40263611..40272009)
AA seq 602 aa
MAMEASRSTNPSADSYVGSLISLISKAEIRYEGILFNINTQESSIALRNVRSFGSEGRKK
DGPQLPPSDKVYEYILFRGSDIKDLHVKSAPPVQTPASIYNDPAIIQSQIPQQAAASTSL
PYSDITSRQDFNSHTSQLGLPKSSPHSSASIYQPGGSLGSWGSLYPFPATNSTLSAPKYV
QETYGAADGLQTQQQSLLQPQSRLLTPPSMHQTMPYPAMSASLPSSSNTVPAPPSLDIPS
PLLPSFSPIAPNLHSPLLSSHSSALPADSTILKPNKGHMLGLHSADTSTNSLQLVTPPTT
ILDESDLTAGAVQPKSVEPRIAFSNVLESEKHVYDASGSLFNRGLAPPLVTPNQFLQPGT
AVMSSSLSSQSIQKDVEMVQVSSTVPLQQTVPGAQAPLLPLPTSADYKVHGDPLHSRQNI
RGRGRGRGHWATHNVTNFTEDFDFVSMNEKFNKDEVWGQLGKKNATLEDGHSRDEDNVGK
TTSDPKPVYVKDDFFDSLSSNTIGGSHRGRSIFSEEKKLNTETFGNSARHRVGHGGRGYG
RSGYGFDRGGHGFDRRGRGLGRDGYGYNRGGGYGHGGQSRDGRNSGRSYGYNERGGWGHH
AT
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggctatggaagcttcgagatctacgaatccatcggcggattcatatgtaggaagcctc
atcagcttgatttctaaagctgagattcgttacgaaggcattcttttcaatattaacact
caggaatcatccatcgccttgcgcaatgttagatcctttggtagtgagggacgtaagaag
gatggtccacaattgcctccgagtgacaaagtttatgagtacattttgtttcgtgggagt
gacataaaggatttacatgtcaaatctgcgccacctgttcagactccagcatctatatac
aacgaccctgccattattcagtcccaaattccacaacaagcagcagcatctaccagcttg
ccttattctgatattacgtcccgacaagattttaattcccacacttctcagctgggactc
cctaagtcatcaccacatagcagtgcatccatatatcagccaggtggaagtttagggtca
tggggttcattgtatccttttcccgccacaaatagcaccttgtctgcaccaaaatatgta
caagaaacttatggggctgcagatgggcttcaaacccagcagcagtctttactccaacca
caatcgagattattgacgcccccttctatgcatcaaacaatgccatatcctgccatgagt
gcatctctacctagcagttctaacactgtacctgctccaccatcgttagatatcccatct
cctttgctgccatcttttagccctattgctccgaatttacattcacctttgctttcttct
cactcttctgcattacctgcagactcaacaattttaaagcctaataaaggtcatatgcta
ggtcttcattctgctgatacgagtacaaatagtctgcagttggtaactccaccgaccact
atattggatgagagtgacttgactgctggcgctgtccaacctaaatctgtggaaccaaga
atcgcatttagtaatgtcttggaatctgagaagcatgtttatgatgcatccggttctctc
tttaataggggcttagccccacctttggtaacaccaaatcagtttttgcagcctggaacg
gctgtaatgtcttcttccctgtcttcacagtctattcagaaagatgttgagatggttcag
gtatcatcaactgtaccactacaacaaacggttccgggagctcaggcaccactactacct
ctacctacatcagctgattacaaggtacatggagatcctttacacagtcgtcagaatatc
agaggaaggggaagaggccgaggacactgggcaacacataatgtcactaatttcacagag
gattttgattttgtttcaatgaatgaaaagttcaataaggatgaggtatggggtcaactt
ggtaagaaaaatgcaactctagaggatggacattctcgagacgaagataatgttgggaaa
acaacttctgaccccaagcctgtttatgttaaggatgactttttcgattcactgtcttcc
aatactattggtggatcacacagagggaggtctattttctctgaagaaaagaaattaaat
acagagacatttggtaattctgcaaggcatcgagttggccatggtggccgtggatatggt
cgcagtggctatggttttgatcgcggaggtcatggttttgatcgtcgtggtcgtggtttg
ggtcgagatggctatggctataatcgtggtggaggatatggtcatggtggacaatcgcgt
gacggtcgtaacagtggaaggagttatggctataatgagaggggtggttggggacatcat
gccacctag

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