Daucus carota (carrot): 108196142
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Entry
108196142 CDS
T05350
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108196142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108196142
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108196142
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
RRM_PARP14_1
Motif
Other DBs
NCBI-GeneID:
108196142
NCBI-ProteinID:
XP_017218764
UniProt:
A0AAF0XID3
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All DBs
Position
7:complement(14212286..14215728)
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AA seq
442 aa
AA seq
DB search
MDSDQGKLFIGGISWETSEEKLTEYFSSYGEVVQTSVMRDKITGKPRGFGFVAFADPSVL
DAVLQDTHVIDGRTVEAKRAMSREEQQVSKSGNASAGRNFGGGGSDRTKKIFVGGLPPTM
SEDEFRLYFQSYGNVTDVVVMYDQQTNRPRGFGFISFDSEDAVDRVLHKTFHDLGGKQVE
VKRALPKDGGGGGRSMGGGGGGYQGYGSSGGNSSSYEGRDSNRYMQSQNTGGGFPSYGSS
GYGASGYWYGNSNGMGSGGYGSYAGANPGYGGPAGGAYGNPNVPNVGYGSGPPGAPRNAY
GTQAASGYGNMGYGNTPWGASGGSAGGPGGAAPTGQSPSGAAGYGNQGYGNGGYGGADGS
YGNPAAYGAVGGRLGSGPNSNPSAGGELQPSGGGYMGGSYGDANGNSGYGSGNYGAQVGP
NGGQVGYGGGYGGAPTRQMQQQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggattcagatcaaggcaagcttttcattggtgggatttcatgggaaacaagtgaggag
aagctcactgagtattttagtagttatggagaagttgtgcaaacatctgtcatgagagat
aagattactggcaagcccagagggtttggttttgttgcttttgcagatccttctgttctt
gatgctgttcttcaagatacccatgtcattgatggaagaacggttgaggccaagagggcc
atgtcaagagaggagcaacaggtatcgaaaagtggaaatgctagtgctggtagaaacttt
ggaggcggtggaagtgacaggacaaagaaaatatttgttgggggcttacctccaacaatg
agcgaggatgaatttcgcctgtattttcaatcatatggcaatgtaactgatgtggttgtc
atgtatgatcagcagactaatcgaccacgtggatttgggtttatatcatttgactctgag
gacgcagttgatcgggttttgcacaagacctttcatgatttgggtggaaaacaagtcgaa
gttaaaagggctcttcccaaagatgggggcggtggcggccgttccatgggtggaggtggt
ggaggttatcagggttatggctcttcaggtggcaattcaagttcttacgaaggccgcgat
tccaacaggtacatgcagtctcagaatactggtggtggatttccatcatacggctcttct
ggatatggtgcatcaggttattggtatggtaacagcaatggcatgggttctggtgggtat
ggtagttatgctggtgcaaatcctggatacggtggcccagctggtggggcatatggtaac
cctaatgtacccaatgttggttatggtagtggtcctcctggtgcacccagaaatgcatac
ggcactcaggctgcctcaggatatggtaacatgggttacggaaatactccttggggtgct
tctggtggctctgctggtggtcctggtggtgcagcacccacaggtcaatctccaagcggg
gctgctggttatgggaatcaaggttatgggaatggaggatatgggggagctgatggatct
tatggaaatccagctgcatatggtgcagttggtggtcggcttggaagtggcccaaatagc
aatccttctgctggtggcgagctgcaacctagtggtggaggatacatgggaggtagctat
ggtgatgcgaatggaaattcaggatatggatctggaaattatggagctcaggtaggacct
aatggagggcaagttggatatggtggtggatacggcggtgctcccactcgacagatgcag
cagcagtga
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