Daucus carota (carrot): 108196201
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Entry
108196201 CDS
T05350
Name
(RefSeq) LOW QUALITY PROTEIN: NF-X1-type zinc finger protein NFXL2
KO
K15683
NF-X1-type zinc finger protein NFXL1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108196201
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
108196201
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-NF-X1
Motif
Other DBs
NCBI-GeneID:
108196201
NCBI-ProteinID:
XP_017218863
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Position
7:complement(19797818..19809141)
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AA seq
869 aa
AA seq
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MMSNTPLRSPSDSDDSDHDSSTSTSINPLRHADLSSTIFRXPIXSYIEISGNSSPDLTKI
QSFLTSSRAGALSCLICLERIKPTDPTWSCTSRCFDVFHLLCIQSWARQSSDLASARAST
RLPISASVAASDTHAIWNCPKCRSEYSKSNIPKTYYCFCGKVENPVRDPWVLPHSCGEIC
GRDLFDKCGHCCLLLCHPGPCPSCPQLVKSVCFCGKIRDVRRCGAKDFSCDGVCSKRLDC
ERHKCGEICHDGECPPCRERGVYRCQCGKVEEERECYGRSFRCEVACGKLLGCGKHVCEK
GCHKEECGECPFQGRRMCPCGKRVYQGMACDVVVPLCGATCEKMLSCGLHRCPERCHRGS
CAETCRTVVTKSCRCGSLKKQVPCYQDLACERKCQSLRDCGRHACKRRCCDGDCPPCSEI
CDRKLRCRNHKCPSPCHRGSCAPCPVMVKISCFCGETHFEVPCGTEKEQKPPKCRKLCRI
ASMCRHGLNRKPHRCHYGACPPCRLICEEKYPCGHKCNLSCHGPKPPPNPEFTLKPKSKK
YIRPSESTPGLPCPPCPELVWRSCRGRHVGAERMMVCSDRREFSCDNLCGNLLRCGNHYC
TKICHALKNQSPVPERGESCEDCDLPCQKDRIPACSHHCPLKCHGKECPPCKVLIKRSCH
CGSMVHVFECIYYNSLSESEQLKVRSCGGPCHRKLPNCTHLCPETCHPGQCPSPEKCVKK
VTVRCGCQTLKKEWLCKDVQMAYCHDDRDPKEIPKSQFGLGLLPCNSDCRKKVTPADSEL
KFRKSEVLEKEEPEKNLPKRRRRRARLEEGQKVSRLQNMFATIKRVFLLAVFIISLIAIA
YFGYKGLLRLSDWMNEMEVQRQRKRRPRI
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaaacactcctctccgatcaccatcagattccgacgacagcgatcacgactct
tccacctccacctccatcaatcctctccgccacgcagatctctcctcaaccatcttccga
tntccgatctgatcatacatcgaaattagcggcaactcatcgccagacctcacaaagatc
caatctttcttaacttcctcacgcgctggcgcactctcttgcctcatttgcctcgaacgc
atcaaacccactgaccccacttggtcttgcacctcccgttgctttgatgtctttcatttg
ctctgtattcaaagctgggctcgtcagtcttctgatcttgcttccgcacgcgcctccacg
cgcctccccatttccgcctccgtggcggcttctgatactcatgctatttggaactgcccc
aaatgtagaagtgagtattctaagagtaatatacctaaaacttattattgtttttgtggg
aaagttgagaacccggttcgtgatccctgggtgttgccacattcttgcggtgagatttgt
gggagggatttgtttgataaatgtggacattgctgtttgttgttgtgtcatcctggcccg
tgtccttcgtgtcctcaattggtgaaaagtgtgtgtttttgtggcaaaattcgtgatgtt
aggcgttgcggtgctaaggatttttcatgtgatggtgtttgttcgaagaggttggattgt
gagagacataaatgtggtgagatttgtcatgacggggagtgtccaccttgccgagagcgt
ggggtttacaggtgtcaatgtgggaaggtggaagaggagagggagtgttatgggaggagt
tttaggtgtgaggttgcttgtgggaagttgcttggttgtgggaagcatgtttgtgaaaaa
gggtgtcataaggaggaatgtggggaatgtccgtttcagggtagaaggatgtgcccgtgt
ggtaagagggtttatcaaggaatggcttgtgatgtggttgtgccattgtgtggagcaact
tgtgagaagatgttaagttgtggtttacacaggtgtcccgagcgatgtcatagaggatct
tgtgcggagacttgtagaactgttgttacaaagtcatgcaggtgtgggagcttgaagaaa
caggttccttgttatcaagacttggcatgtgaaagaaagtgtcagagtctaagggattgt
ggacggcatgcttgcaagcgccgttgctgtgatggggattgcccaccatgttcagagatt
tgtgataggaagcttcgttgtaggaaccacaaatgcccgtctccatgtcacagaggttct
tgtgcaccttgtcctgtgatggtgaagatttcatgtttctgtggtgagacacactttgag
gttccttgtggcactgaaaaagaacaaaagcctcctaaatgtcgtaaactatgtcgcatt
gcttctatgtgtaggcatggattgaatcgcaagccgcacagatgccattatggagcctgc
cctccttgtcgtttgatatgtgaagaaaaatacccatgtggccataagtgcaatttaagc
tgtcatggtcctaaacctcctccaaatcctgaatttacattgaagccgaagtcaaaaaag
tatattcgtcccagtgaaagcacacctgggttgccctgccctccatgccctgaacttgtt
tggcggtcatgtcgtggccgtcatgttggagccgaaaggatgatggtatgctcagataga
agagagttcagttgtgacaatctgtgtggcaatcttctacgttgcggaaatcattattgt
actaaaatttgccatgcattaaagaaccaatctcctgtacctgaaagaggcgagtcttgt
gaagattgtgaccttccttgccaaaaggataggatccctgcatgctcacatcattgccca
ttaaaatgtcatggcaaagagtgtcctccatgcaaagtgctgatcaagcgttcatgtcac
tgtgggtctatggtccatgtatttgagtgcatatactacaatagcttgtctgaaagtgag
caactgaaagttcgttcatgtggtggaccctgccacagaaaattacctaactgtacacat
ctgtgcccagaaacctgtcatcctggtcagtgcccatcacctgaaaagtgcgtgaaaaag
gttactgttcgttgcgggtgtcaaacattgaaaaaggagtggttgtgtaaggatgtacaa
atggcttattgccatgatgatcgtgatccaaaagaaattcctaaatctcagtttggattg
ggacttcttccttgcaattcagattgcagaaaaaaagtaactcctgctgattcagaatta
aaattccgtaaatcggaagttcttgagaaggaagaacccgagaaaaacttgccaaaacgt
agaagaaggcgtgcacgattagaggaaggccagaaagtttcaagactgcagaacatgttt
gcgactataaagcgggtatttctgctagctgtgttcatcatttcgctgattgctatagca
tattttggttacaaaggcctcttgaggctttctgactggatgaatgaaatggaagtccaa
agacagcgaaagagacgcccacgaatctga
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