Daucus carota (carrot): 108196230
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Entry
108196230 CDS
T05350
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1
KO
K14411
RNA-binding protein Musashi
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108196230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108196230
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108196230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
Nup35_RRM_2
RRM_PARP14_3
SET1_RBD
Motif
Other DBs
NCBI-GeneID:
108196230
NCBI-ProteinID:
XP_017218914
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All DBs
Position
7:complement(35797591..35806466)
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AA seq
417 aa
AA seq
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MSDKKLVVLGIPWDIDTDGLRDHMSKFGDLDDCIVMKDRSTGRSRGFGYVTFTSVDDAKS
ALASEHSLGDRVLDVKVATPKEVMRVPSKKVSRIFVARVLPSVTEAEFRSYFEKYGEITD
LYMPKDPRSKGHRGIGFITFANPESVDDLIAESHELGGSAVVVDRATPKEEDFRPVSRMP
LERQPGGYGAYDSYINAATRYADLGAPTRYDYPGAMYGRGQSGRGISKKIFVGRLPQEAS
IEDLRQHFGEFGRIIDVYIPKDPKRSGHRGFGFVTFADEGVADIVSRRSHEICGQQVAID
SATPVDDAGRSGHHMMDEPEPFADYAGPTRTYGRMYGSLDFNDWGGYGIGEGRPGGYGPY
GINGGRPGGYGIGGGRPGGYGISGGRPGGYGIAGRPDGYGTGGGRPPSRADSRYRPY
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacaagaagcttgttgttttaggtattccttgggatatcgacaccgatggattg
agggatcatatgtccaaatttggggatttggatgactgcattgttatgaaggatcggtct
actgggcggtctcgaggttttggatatgtaacatttacaagtgtagatgatgctaagagt
gcattggctagtgagcactcattaggcgatagagtcctggatgtaaaagttgctactccg
aaggaggttatgcgagtaccttccaagaaagtcagtaggatatttgtagctcgggtcctc
ccatctgtaacagaagctgaattcaggagttactttgagaaatacggtgaaataacagat
ctatatatgccaaaggatcctagatccaaaggacaccgaggaattgggttcatcactttc
gcaaacccagaatccgtggatgatctgatagctgagagtcatgaattaggaggttctgct
gtagttgtggaccgagcaactcctaaggaggaagacttcagaccagttagtcgaatgcca
ttggagcgccagccaggtggttatggtgcctacgattcctacatcaatgcagcaactaga
tatgctgatctaggtgcaccaactagatatgattatcctggtgctatgtatggaagggga
caatctggtcgtggaataagcaaaaagatatttgttggccggcttcctcaagaggcaagt
attgaagatcttcgccagcattttggtgaattcggccgtattatcgatgtttatattcca
aaggatccaaagagaagtggtcacaggggttttggttttgtgacctttgctgatgaaggg
gttgctgatattgtgtctcgaaggtcgcatgagatctgtggacagcaggttgcaattgat
tcagctacgcctgttgatgatgccggtcgcagtggacatcacatgatggatgaacctgag
ccatttgctgattatgctggtccaacacggacgtacgggaggatgtatggaagcctggat
tttaatgattggggtggttatggaattggtgagggaagaccaggtggttatggtccttat
gggatcaatggcggaaggcctgggggttatgggattggtgggggacggccgggtggttat
ggaatcagtggggggagaccgggtggttatggaatcgcaggaagaccagatggttatgga
actggtgggggaagaccaccatcaagagctgattcgaggtataggccttactag
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