Daucus carota (carrot): 108196232
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Entry
108196232 CDS
T05350
Name
(RefSeq) cyclic nucleotide-gated ion channel 2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
108196232
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
dcr04040
]
108196232
Ion channels [BR:
dcr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
108196232
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GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
TMEMspv1-c74-12
Ion_trans_2
IQ
Motif
Other DBs
NCBI-GeneID:
108196232
NCBI-ProteinID:
XP_017218915
UniProt:
A0A161ZPK8
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Position
7:complement(31938342..31941793)
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AA seq
713 aa
AA seq
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MPISTPHLPTSSSFPSRLFFMRPAQPNNSTNDDDDNTGNGAECYACTQVGIPAFHSTSCD
RANQPQWEASAGSSLVPISSRLDLKPTAAERRRRQDSGPFGRVLDPRSKRVQKWNRVFLL
ARGMALAIDPLFFYALSIGRSGSPCLYMNGGLAAIVTVLRTCVDAVHLFHLWLQFRLAYV
SRESLVVGCGKLVWDSRAIADHYVHSLKGFWFDIFVILPVPQAIFWLVVPKLIREEKIKL
IMTILLLMFLFQFLPKVYHCLCLMRRMQKVTGYLFGTIWWGFALNLIAYFIASHVAGGCW
YVLAIQRVASCLTQQCASRASCNLSLSCSQEVCYQFFQSTDTSGYPCSGNSTMMVNIPLC
LDANGPFRHGIYQWALPVISSNSITVKILYPIFWGLMTLSTFGNDLEPTSNWLEVVFSIV
IVLSGLMLFTLLIGNIQVFLHAVMAKKRKMQLRIRDMEWWMKRRQLPSQLRQRVRHYERQ
KWAAMGGDDEMELVKDLPEGLRRDIKRYLCLDLIKKVPLFETLDGLILDNICDRVVPLVF
SKDEKIIREGDPVPRIMFIVRGRVKSSQNLSKGVVATSILEPGGFLGDELLSWCLRRPFV
DRLPSSSATFTCIESTEAFALSANNLRYITDHFRYKFANERLKRTARYYSSNWRTWAAVN
IQLGWRRYMTRTRPPMNHVTVNGGGSDSGRDSEQRLRQYAAMFLSLRPHDHLE
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgcctatctccactccccacctccctacttcctcctccttcccctcaaggttgtttttc
atgcggccggctcagccaaacaactccactaacgacgacgatgataacacaggcaacggg
gctgagtgctacgcttgcactcaagtaggcatccctgctttccactccacatcatgtgac
cgggctaaccaacctcaatgggaagcctctgcggggtcttcactcgtcccaataagctcc
cgcctagaccttaagcctactgcagctgaacgtcgtcgtcgtcaagactcaggtcctttt
gggcgcgtgcttgatccaagaagcaagcgtgtgcagaagtggaacagagtgttcttgctg
gcccggggcatggccttggctattgatcctctgttcttttatgcactatcaattggtcga
tctggctcgccctgtttgtatatgaatgggggcttggcggccattgtgaccgtgctgcgc
acatgtgtggacgctgtgcatctttttcatctctggttgcagtttcggttggcttatgtt
tcgagggagtctctggtggttggttgcgggaagctggtgtgggactcacgcgctattgcg
gatcattatgttcattctctgaagggcttctggtttgatatatttgtcatacttccggtt
cctcaggctatattttggttggtggttccaaaattgattagagaagagaagattaaattg
atcatgacaattcttctacttatgttcttattccaattccttcccaaggtctaccattgc
ctttgcttaatgagaagaatgcagaaggttacaggttatctctttggcaccatctggtgg
ggttttgcacttaatctcatcgcgtacttcattgcttctcatgttgctggaggatgttgg
tacgttctcgctatacaaagagtagcttcgtgtctcacacaacagtgtgcaagcagagct
tcatgtaacctctctttatcgtgctcacaagaggtctgttaccagtttttccagtctaca
gacacttcaggatatccatgcagtgggaactcgacgatgatggtgaatatcccgctgtgt
ctggatgctaatggaccatttcgccatggtatctaccaatgggctctccctgtcatttcc
agcaactcaattactgtcaagattctttatccaattttttggggtctaatgaccctcagt
acttttggaaatgacttggaacccacaagtaactggctagaagttgtcttcagtatagta
attgtgctcagtggtttaatgctctttactctgttgattggaaacattcaggtattcttg
catgccgtaatggcaaagaagagaaaaatgcagcttcggatccgagacatggaatggtgg
atgaagagaagacagttaccttctcaactaagacaaagagttcggcattatgaacgccaa
aaatgggcggccatgggtggagatgatgagatggagctggttaaagacttaccggaaggg
cttcgacgtgacatcaaacgatatctttgcctagaccttataaaaaaggtgcccctattt
gaaacattagatggactcattcttgacaacatatgtgatcgtgttgtgcctctcgtcttc
tccaaagatgaaaagattattcgagaaggagatcctgtaccaagaattatgttcattgtc
cgtggtcgcgtcaagagtagccaaaacctgagcaaaggtgtggtagccacgagcatactt
gaaccaggaggctttttgggtgatgaactcctgtcatggtgccttcgacgtccgtttgtg
gacaggctaccttcctcctcagccacatttacatgcatcgagtcaacagaggcatttgca
ctaagtgcaaataatcttcgatacattactgatcacttccgctacaagtttgcaaatgag
aggctgaagagaacagcgagatactattcatcaaactggagaacctgggcagctgttaat
atacagttgggttggaggcgttacatgacaaggacgaggcccccgatgaatcatgtaact
gtaaatggcggtggtagtgacagtggcagggacagtgagcagagactccggcagtatgca
gcaatgttcctgtctctcaggccacatgaccatctggaataa
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