Daucus carota (carrot): 108196253
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Entry
108196253 CDS
T05350
Name
(RefSeq) nuclear pore complex protein NUP107 isoform X2
KO
K14301
nuclear pore complex protein Nup107
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108196253
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
dcr03019
]
108196253
03036 Chromosome and associated proteins [BR:
dcr03036
]
108196253
Messenger RNA biogenesis [BR:
dcr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
108196253
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108196253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup84_Nup100
Motif
Other DBs
NCBI-GeneID:
108196253
NCBI-ProteinID:
XP_017218943
UniProt:
A0AAF0XPH9
LinkDB
All DBs
Position
7:41505469..41521243
Genome browser
AA seq
1059 aa
AA seq
DB search
MEIDMIEPEDIAVRERFRRYGKRPLPPKSYEIRSNSALIIENIKQELESFDAAAHSQGIA
SNTHSNFNRRSLIDSHGGSEIEAASNAVLQFGNHPLKICKTEDDDLTYSGDAMFAFFAQL
LDSTLQGLMPVSDLILKLEKECRDVSKSIRYGSEKLRIGEDKLMRQTARLLLDEAASWSL
LWHLYGKGEEFPEDLVVTPTTSHLEACQFVVEDHTAQLCLRIIQWLEGLAAKSLDLDNEI
RGSHVGTHLPSTGVWHHTQRLLRKGVSNPKIIHHLDFDAPTREHAQALPDDKKQDESLLE
DVWILLRAGRLEEACNLCRSAGQPWRAATLCAFGGLDHFPSVEALMKNGKNRSLQAVELE
SGIGHQRRLWKWASYVASERIAEEEGSKYEAAIYASQCSNLKRILSICTDWESACWAMAK
SWFNVQVDMELARFQPGAISQLKSCEDAIENSPGEQVCVSQPIAGPESWPLQVLNQQPRD
LSALLQNLHSSDVVHEAVHRGCREQHRQIEMRLMLGDIPQLLDLIWSWISPSEDDQNVFR
PRGDPQMIRFGAHLVLVLRYLLAEEMADTFKEKIMTLGDLIIHMYAMFLFSKQHEDLVGI
YASQLARHRCIDLFVHMMELRLNGSVHVRYNIFLSAIGYLPFTAEDETKGSFIEIIERVL
SRSRELKVENYEKASIVAEQHRIQSKQKAMVIQWLCFTPPSTITDVKSVSAKLLFRALMH
SNVLFREFSLLSMWRVPAMPVGAHTLLSLLAEPLNQLTDSAEGYDVTENLKEFNDWSEYY
SCDATYRNWLKIDMENAEVAPHELSGEEKQRAVAAARETLDSSLQLLQRSGNSWLILAEN
GIDESPEPVFLELHATAMLCLPSGECMSPDPTVCTTLMSCLYSSVSEEVVLNRQLMVDVT
MAAKNNYCINVVLRCLAAEGDGLGPHELNDGGLLATVIASGFKGELVRFQAGSTIEISRI
DAWYSNSEGSLEEPATYIVRGLCRRCCIPEIILRCMQVSVSLMESGNLPEGHDDFIELVS
CPETRFLCLFSQQQLQEFLLYERDFSICKMAELQDEPIS
NT seq
3180 nt
NT seq
+upstream
nt +downstream
nt
atggagatcgatatgattgagccggaagatatcgccgtccgagagcgttttcgccgttac
ggaaaaagaccgttacctccaaaatcttacgaaatcaggtcaaactccgcgctgattatc
gaaaatatcaaacaagagcttgagagttttgatgctgctgcacattcacaaggaattgca
tcaaacacacattctaattttaacaggagatccttgattgatagtcatggagggtccgag
attgaagctgcttctaatgcagttcttcaattcggaaatcatcccctcaaaatatgcaaa
accgaggacgatgacttaacgtatagtggagacgcaatgtttgctttctttgctcagctt
ctggattctactcttcaaggtttaatgcccgtctctgatttgatattgaaactggagaaa
gaatgtcgtgatgtgtcaaagtcaataaggtatggcagtgagaaactaaggattggagag
gacaaactaatgaggcagaccgctcgacttctactagacgaggctgcttcctggtctctt
ctgtggcatctttacggcaaaggtgaagaatttccagaagatctagtcgtgactccaaca
acatctcacttggaggcttgccagtttgttgtggaagatcacacagcacaactttgcctt
agaatcatccagtggcttgaaggtttagctgctaaatctcttgatttggataatgagatt
cgaggttctcatgttggtactcatttgcctagtacaggggtttggcaccatactcaacgc
ttattacgaaagggcgtctcaaatccaaaaattatccatcatttggattttgatgctcca
actcgggaacatgctcaggcactgcctgatgacaaaaaacaagatgaatcacttttggaa
gatgtctggattctgttaagggctggaagactggaagaggcatgcaatctttgccgatct
gctggacagccatggagggctgcaactttatgtgcttttggaggattggatcactttccg
tcggttgaagctttaatgaaaaatggcaagaacagaagcctgcaagcagttgagctggaa
agtgggattggtcatcaacgccgtctttggaaatgggcttcctatgttgcatctgagagg
attgcagaggaagagggcagtaaatatgaagcagcaatttatgcttcccaatgcagtaac
ttgaagcgcattctttctatttgcacagattgggagtctgcctgctgggcaatggccaag
tcatggttcaatgttcaggttgacatggaattagctcgctttcaaccgggtgctataagt
cagttaaaaagctgtgaagatgctattgaaaatagtcctggagaacaggtttgtgtttct
cagccaatagctggaccggaaagttggcctctccaagtattgaatcagcaacctcgagat
ctttctgcgcttctgcagaatctccattctagtgatgtggtgcatgaagctgttcatcgc
ggctgcagagagcagcataggcaaattgagatgcgtcttatgctaggagatataccacag
cttctggatcttatctggtcgtggatatcgccttctgaagatgatcaaaatgtcttcagg
cctcgtggtgatccacaaatgattaggtttggtgcacatttagtgcttgtgcttcgatat
ttacttgcagaagagatggcagatactttcaaagagaagataatgactcttggtgacctc
atcatacacatgtacgcaatgtttttattttccaaacaacacgaggatttggtcggaatc
tatgcttctcagctggcaaggcatcggtgcattgatctgtttgtgcacatgatggagttg
cggcttaatggaagtgtgcatgtcagatataatatattcctttcagctatagggtacttg
ccattcactgctgaagatgaaacaaagggcagttttattgaaattatagaaagggttcta
tcaagatcaagagaattaaaagttgaaaattatgaaaaagcttccattgtggcagagcag
catagaatacaaagtaaacagaaagctatggtgattcagtggctctgctttacgccgcct
tcgacaatcactgatgttaagagtgttagtgccaaacttctctttcgagcactgatgcac
agcaatgtcctgttccgggaattttctcttctgtctatgtggagagtaccagcaatgccc
gttggagctcacaccttgcttagtttacttgctgagcccttgaatcagcttacagattct
gctgagggttatgatgttactgaaaatctgaaggagttcaatgactggagtgagtactac
tcatgtgatgcaacttaccgcaattggctaaagattgatatggagaatgccgaagttgct
cctcacgaattatcaggtgaggaaaagcaaagagcagttgcagcagcaagagaaacatta
gattcatcactgcagctgttacaaagaagcggaaattcgtggttaattctggctgaaaat
ggtatagatgaatcacccgaacctgtatttttggagttacatgcaactgcaatgctttgt
cttccttctggtgagtgcatgtctccagatcccactgtgtgcactacattaatgagttgc
ctttactcttcagtgagtgaggaagttgtgctgaatcgccaattaatggtagatgtcacc
atggcagctaagaacaattactgcattaatgttgtgcttcgctgcttggcagcagagggt
gacgggctgggaccacatgaactcaatgatggtggtcttcttgctactgtaattgcatca
ggcttcaaaggtgagcttgttcgatttcaagctggatcaacaattgagatctctagaatc
gatgcctggtattcaaacagtgaaggttctttggaggaaccagcaacatacattgtgagg
gggctttgtcgcaggtgttgcattccagaaattattcttcgctgtatgcaggtttctgtt
tcacttatggagtctggaaatctacccgaaggccatgacgattttattgaactcgtgtca
tgccctgaaactagatttttgtgtttgtttagtcagcaacagttacaggaattcttgttg
tacgagagagatttctctatatgcaagatggcggagcttcaggatgaacctatctcctga
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integrated database retrieval system
