KEGG   Daucus carota (carrot): 108196369
Entry
108196369         CDS       T05350                                 
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform
  KO
K04354  serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03015  mRNA surveillance pathway
dcr04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    108196369
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    108196369
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:dcr01009]
    108196369
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108196369
   03036 Chromosome and associated proteins [BR:dcr03036]
    108196369
Protein phosphatases and associated proteins [BR:dcr01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     108196369
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     108196369
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     108196369
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd ComGF
Other DBs
NCBI-GeneID: 108196369
NCBI-ProteinID: XP_017219115
UniProt: A0AAF0XME7
LinkDB
Position
7:41100509..41110528
AA seq 512 aa
MNGGDGEVVAAPPPLEWKFSQVFGERTAGEEVQEVDIISAIEFDKSGDHLATGDRGGRVV
LFERTDAKEHGGSRRDLERIDYPVSRHPEFRYKTEFQSHEPEFDYLKSLEIEEKINKIRW
CQTANGALFLLSTNDKTIKFWKVQEKKVKKISEMNTDLVKSNGNGSIASSSVSSSPSLYR
SNGGCSDTSLSFSSNDLSFPPGGISSLHLPVVTSNETSLMARCRRVYAHAHDYHINSISN
NSDGETFVSADDLRINLWNLEISNQSFNIVDVKPANMEDLTEVITSAEFHPTHCNTLAYS
SSKGSIRLIDLRQSALCDTHSKLFEEQEAPGTRSFFTEIIASISDIKFGKDGRYILSRDY
MTLKLWDINMDSGPVSTFQVHEYLRPKLCDLYENDSIFDKFECCLSGDGQRVATGSYSNL
FRVFGSVAGSTEATTLEASKNPMRRQVQTPARPARSLSSSLTRVVRRGAESPGIDANGNS
FDFTTKLLHLAWHPSENSIACAAANSLYMYYA
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgaacggcggcgatggagaggtcgtggcagcgccaccgccgcttgagtggaaattctcg
caggtcttcggcgagcgcaccgccggcgaggaagttcaggaagttgatatcatatcagct
attgagttcgacaaatctggtgaccatcttgctactggtgatcgtgggggtagagtagtg
ttattcgaaaggactgatgcaaaagagcatggtggaagcagaagggatttggagaggata
gattatccagtcagtaggcatcctgaattccgctacaagacagaatttcaaagtcatgaa
cctgagtttgattatctgaagagcttagagattgaggagaaaatcaacaaaatcagatgg
tgccaaacagcaaatggggctctttttcttttgtctacaaatgacaagaccattaaattt
tggaaggttcaagagaaaaaggtcaaaaaaatatcagagatgaacactgaccttgtaaaa
agtaacgggaatggcagtattgccagctcaagtgtctcttcaagcccaagtttgtatcgt
tcgaatggaggatgctcagatacatctttatctttttcaagcaatgatttatcattccca
ccaggggggatttcatcactacatttacctgtggtaaccagcaacgagaccagcctcatg
gcacgatgcagaagagtatatgcccatgcacatgactatcatattaactcgatttcgaat
aatagtgacggggaaacatttgtttcagcggacgatttgcggattaacttatggaaccta
gaaataagtaatcagagttttaacattgttgatgtgaaacccgcaaatatggaggatcta
actgaggtgataacctcagcagagtttcatcctacccattgtaacacattggcatatagt
agttcgaaaggatcaatccgacttattgatttgcgacaatcagctttatgcgacacacat
tctaaactatttgaggaacaggaagcacctggtacaagatcttttttcactgagattatc
gcctctatttctgatataaaatttgggaaagatggaagatatatattaagtcgtgattat
atgactctcaagttgtgggatatcaatatggattctggcccagtttcaacctttcaggtt
cacgagtatttaagaccgaagttatgtgatttgtatgaaaatgattccatctttgataag
tttgagtgttgcttgagcggagatggtcagcgggtagcaactggttcttatagtaatttg
ttccgggtgtttggatctgttgctggtagtactgaagcgaccacattggaagctagcaaa
aatcctatgaggcgacaagttcagacacctgcaaggcctgctagatccttaagcagcagt
ctaactcgtgttgttagacgaggggccgaaagcccagggattgatgccaatggtaattca
tttgatttcaccaccaagttgctccatctggcatggcatccaagtgaaaactcaattgca
tgtgctgctgcaaacagtttgtacatgtattatgcatag

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