Daucus carota (carrot): 108196401
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Entry
108196401 CDS
T05350
Name
(RefSeq) arginine--tRNA ligase, cytoplasmic isoform X1
KO
K01887
arginyl-tRNA synthetase [EC:
6.1.1.19
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
108196401
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
dcr01007
]
108196401
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
dcr03016
]
108196401
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108196401
Enzymes [BR:
dcr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.19 arginine---tRNA ligase
108196401
Amino acid related enzymes [BR:
dcr01007
]
Aminoacyl-tRNA synthetase
Class I (G)
108196401
Transfer RNA biogenesis [BR:
dcr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
108196401
Prokaryotic type
Other AARSs
108196401
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
108196401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1d
DALR_1
Arg_tRNA_synt_N
Motif
Other DBs
NCBI-GeneID:
108196401
NCBI-ProteinID:
XP_017219156
LinkDB
All DBs
Position
7:23141190..23151057
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AA seq
642 aa
AA seq
DB search
MSSTALSCVFMPPVSHPFVSRYISPFSSFPCFSKTHIFRRRGPSLIKANTISNMATEEEY
RGSPKQQLEKLFKASIRVTVPDLPDVEPLIAACNPRFGDYQCNNAMSLWTTIKGKGTEFK
GPQPVGQALKNNLPTSEMVESLSIAGPGFVNVVLSKQWIAKSIHKMLTDGVETWAPKLSV
KRAIVDFSSPNIAKEMHVGHLRSTIIGDTLARMLEFSNVEVLRRNHVGDWGTQFGMLIEF
LFEKFPDWENANDQAIGDLEVFYKASKQRFDSDSAFKERAQQAVVSLQGGDEKYRKAWKQ
ICEISRKGFEKVYKRLGVHLEEKGESFYNPFIPMVLGLLNEKGLVEESEGARVIFIEGKK
IPLIVVKRDGGFNYASTDLTALWYRLNEEKAEWIIYVTDVGQQEHFDMVFTAAKRAGWLP
TEDSKYPKTNHVGFGLVLGEDGKRFRTRSTEVVKLVDLLDEAKIRCRDALIERGRGTDWT
KEELEQTAEAVGYGAVKYADLKNNRLTNYTFNFDQMLNDKGNTAVYLLYAHARICSIIRK
SGKDMEELKKVGKIELIEDAERVLGLHLLQFAEIVEEACIKLLPNVLCEYLYGLSEDFTG
FYSTCQVVGSAEETSRLLLCEATAVVMRKCFHLLGITPVYKI
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaccgcattgagttgtgtttttatgccgccggtatcacatccatttgtgtct
cgttatatatctcccttctcctctttcccttgtttctctaaaacccatatatttagaaga
aggggtccttctctaatcaaggctaatacgatttcgaacatggcaacagaggaagaatat
cggggtagtcctaaacaacaactagaaaagttattcaaagcatcgattagagtcacagtt
cctgacctgcctgatgttgaaccactgattgctgcttgtaatcccagattcggtgattac
caatgcaacaatgctatgagcttatggacaacaataaaggggaagggtactgaatttaaa
ggccctcagcctgttggacaggctcttaaaaacaatcttccaacatcagaaatggttgag
tcattaagcatagcagggcctggctttgtgaatgttgtattgtcgaagcagtggatagcc
aagagcatccataagatgctaacagatggcgtcgaaacatgggcgcctaagctttcagtt
aaaagagctattgtcgacttctcttcacccaacatagcaaaagaaatgcatgttggtcac
ctaagatctaccataataggagatacactagcccgtatgcttgagttttcaaatgttgaa
gtcctaagaagaaatcatgttggggactggggtacacagtttggtatgttaattgaattc
ctattcgaaaagtttccggactgggaaaatgctaatgatcaggccattggtgatcttgag
gtattctacaaggcttcaaaacagagatttgacagtgattctgctttcaaagagagagca
cagcaggcagtagtcagtctccagggaggtgatgagaaataccgcaaggcatggaaacag
atatgtgaaattagccggaagggttttgagaaagtttataaaagacttggagttcattta
gaggagaagggcgaaagtttttataatccttttattcctatggttttggggttgctaaat
gagaagggacttgttgaagaaagtgaaggggcgcgtgtgatcttcattgaagggaaaaag
ataccacttattgttgttaagagagatggtggattcaattatgcttcaactgatttaaca
gctttatggtaccgtcttaatgaagaaaaagccgagtggatcatatatgttacagatgtt
gggcagcaagagcactttgatatggtattcacagcagctaagcgtgcaggttggcttccc
actgaagacagtaagtaccctaaaacgaatcatgtaggctttggtcttgttcttggagaa
gatggaaagcgatttcgaactcgaagtactgaggtggtcaaattagttgatctacttgat
gaagccaagattcgctgtagggatgctcttattgaacgaggtaggggaacagattggacc
aaggaggaacttgagcaaactgctgaagctgttggatatggtgccgttaagtatgctgat
ctgaagaacaacagattgacaaactacacattcaacttcgatcagatgcttaatgataag
ggaaatactgctgtgtatttgctttatgcacacgctcgaatttgttcgatcatcaggaaa
tctggtaaagacatggaggaattaaagaaggtcggaaaaattgagttgattgaagatgct
gagcgtgtgctaggactccatttactacagtttgctgagattgttgaagaggcttgcatc
aagctcctgccgaatgtgttgtgcgaatacttatatggcttatctgaggattttacagga
ttctattccacttgtcaggttgttggttcggccgaggaaactagcaggcttttgctgtgt
gaagctacagcagttgtcatgagaaaatgcttccatttattagggattacacctgtatac
aaaatttga
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