Daucus carota (carrot): 108196403
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Entry
108196403 CDS
T05350
Name
(RefSeq) rhamnogalacturonan I rhamnosyltransferase 1 isoform X1
KO
K23280
rhamnogalacturonan I rhamnosyltransferase [EC:
2.4.1.351
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
dcr01003
]
108196403
Enzymes [BR:
dcr01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.351 rhamnogalacturonan I rhamnosyltransferase
108196403
Glycosyltransferases [BR:
dcr01003
]
Polysaccharide
Structural polysaccharide
108196403
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
O-FucT
EF-hand_7
BESS
Motif
Other DBs
NCBI-GeneID:
108196403
NCBI-ProteinID:
XP_017219161
UniProt:
A0A161ZM43
LinkDB
All DBs
Position
7:33184847..33188709
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AA seq
512 aa
AA seq
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MCKLGDEKMVEREEMWKAGMKNVGVDKIGRPNLVVSRAPMMLWIVRGVTTVLIWTFVIRL
LIMGEIMGPKLLKSWPSCFTPTTLYTNEVKLSSVAVLPKDFHPPKRIYKNNGYLLVSCNG
GLNQMRGAICDMVAIARYLNVTLIVPELDKTSFWADPSEFKDIFDVDHFITSLRDEVRIL
KELPPRLKRRVKLGLFHSLPPVSWSDISYYHDQILPLLQKYKVVHLNRTDARLANNGLPV
EIQKLRCRVNFSGLRFTSQIEELGRKVVTILRQNGPFVVLHLRYEMDMLAFSGCSHGCNV
EEVEELTRMRYAYPWWKEKVINSDFKRKEGLCPLTPEETALILTALGINHDVQIYIAAGE
IYGGSRRMESLAAAYPNLVRKEKLLQPSELMYFQNHSSQMAALDYLVSLESDIFVPTYDG
NMAKVVEGHRRYLGFKKTIALDRKLLIDLIDQYHSGSLSWDEFSSIVKESHADRMGTARR
RLVLPDKPKEEDYFYANPHECLQPLVEPLGLA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgtgtaaattaggggatgagaagatggtggaaagagaggaaatgtggaaggcggggatg
aaaaatgtgggagttgataagattgggagaccgaatttggtggtttctcgcgctccgatg
atgctgtggattgtgaggggagtgacaacagtgttgatttggacttttgttataagatta
ttgattatgggggagattatggggcctaaattgttgaagagttggccttcttgttttact
ccaactacattgtatactaatgaggttaaattatcgagtgtcgctgttcttcccaaagat
tttcatcctcccaagaggatttacaagaacaatggctatctcttggtttcttgcaatgga
ggactcaatcagatgcgaggagcaatttgcgatatggttgctattgcaagatatttaaat
gtcacgctaattgtcccagaactggataaaacttcattttgggcagatccaagtgagttc
aaggacatatttgatgtggaccatttcatcacatccttaagagatgaagttcgtattttg
aaagagcttccgcctcgactaaaaagaagagttaagcttggactgttccactcattgccg
cctgttagttggtctgacatttcctactatcatgatcagatactgccccttcttcaaaag
tataaagttgtgcatttaaatagaacagatgctcgacttgctaataatgggctaccagtg
gagattcagaagttgcggtgcagagttaattttagtggtctgagatttacttcccaaata
gaggaactgggtagaaaggttgtcaccatcttgaggcaaaatggcccttttgtagtcctc
catctaagatacgagatggatatgttagcattctctggctgcagccacggctgcaacgtt
gaagaggtggaagagctaacaagaatgaggtatgcctacccctggtggaaggaaaaagtt
ataaattcagactttaaaaggaaagaaggtttgtgtcctctgacacctgaagaaactgct
ctaattttaactgcattgggtatcaaccatgatgttcaaatttatattgctgctggagaa
atttatggtggaagtcgtagaatggaaagcttggcagccgcatatcccaatctggttaga
aaggaaaagctgctacaaccttcagaattgatgtatttccagaaccactcatcccaaatg
gctgcattagactatcttgtctccttggagagtgacatatttgtgcctacatatgacgga
aacatggccaaagttgttgaaggacatcgtagatatctaggattcaagaagaccattgca
ctggatagaaagcttttaattgatttgattgatcaatatcatagtggatcgttaagctgg
gatgaattctcttcaatagtcaaggaatctcatgcagatcgaatggggactgcaagaagg
cgcttagtcttgccagataaacccaaggaagaagattatttctatgccaatccgcatgag
tgtttacagcctttggttgaaccactgggactcgcatga
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