Daucus carota (carrot): 108196408
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Entry
108196408 CDS
T05350
Name
(RefSeq) sphingosine-1-phosphate lyase
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00600
Sphingolipid metabolism
dcr01100
Metabolic pathways
Module
dcr_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
108196408
Enzymes [BR:
dcr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
108196408
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
108196408
NCBI-ProteinID:
XP_017219165
UniProt:
A0A164THF7
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Position
7:complement(22524050..22530977)
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AA seq
542 aa
AA seq
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MESLSWLCSYVDEFRASANQYLSNFEPLVLLVFPIFSLVLAQYVRFLLGVVNDKGLNATV
LGFFMSFIKLVPGVQQYIDAEKQKVVDQLQSSDKSKRDGWASELPKTGLGFGVIDRLKDA
KANDVPWQGKCSGTVYIGGTESEGHFSLINEACAMFAHTNPLHLDVFQSVVRFESEVVAM
TAALLGSKEICSGGKICGNMTSGGTESILMAVKSSRDYMKAKKGITSPEMIIPVSAHSAY
DKAAQYFNIKLWRVPVNKEFQADSRAIKRFINKNTIMIVASAPGFPHGIIDPIEELGELA
SKFGICLHVDLCLGGFVLPFARKLGYPIPPFDFTVQGVTSISADVHKYGLAPKGTSVVLY
RNHDIRKCQFVAVTEWTGGLYVSPTIAGSRPGGLIAGAWAALMSLGMEGYLEHTREIMEA
SKRLQKGLKEISELYIIGRPDMTVVAFGSNNLDIFEVNDIMSSKGWHLNALQRPNSIHIC
ITLQHVPVIDGFLKDLKDSVQTVKKNPGPVSGGLAPIYGAAGKMPDRGMVGDLLVDFMDS
SC
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgttgtcgtggttgtgtagttatgtcgatgagtttcgagcttctgctaatcaa
tatttatcgaatttcgagcctctcgttttgctcgtgttcccgattttctcgctcgtttta
gctcaatatgttcgatttttgctcggcgttgtcaacgataagggactcaatgctactgtc
ctagggtttttcatgtcatttatcaaattggttcctggtgtacaacaatatattgatgcg
gagaaacaaaaggttgtagatcaattacagtcttccgataaatcaaaaagagatggttgg
gcaagtgagctgccgaagacaggattaggatttggagtaatagacagattgaaagatgca
aaagcaaatgatgtgccttggcaaggcaaatgctctggcacagtctatattggaggcacg
gagtctgaaggacatttttccttgataaacgaggcttgtgcaatgtttgctcataccaac
cctctgcatttggatgtcttccaaagtgttgtacggtttgagtctgaagtggttgcaatg
acagctgcattattaggaagtaaggaaatatgttctggaggaaaaatttgtggtaacatg
acttctggtggaactgaaagtatcttaatggcagtaaagtcgtcacgtgattatatgaaa
gccaagaaggggatcacaagtccagaaatgattattccagtatctgcccactctgcttat
gataaggctgctcaatattttaatatcaaattatggcgtgttcctgtaaataaagagttc
caagcagattctcgagctattaagcggtttatcaacaaaaacactataatgattgttgca
tctgcccctggttttcctcatggcatcattgatcctattgaggagcttggtgaattggcc
tctaaatttggaatctgtttgcatgttgacctgtgtcttggtggttttgtgttgccattt
gctcgtaaacttgggtaccccattccaccttttgatttcaccgttcaaggagttacttca
atatcagcggacgtgcataaatatgggttggctccgaaagggacaagtgtagttctctac
agaaaccatgacatccgaaagtgccaatttgttgctgttactgagtggacgggtggactt
tatgtgtctccgaccatagctggtagcaggcctggaggtttgattgctggagcttgggct
gccttaatgtctctagggatggaagggtatctagagcacacaagagagattatggaagct
tcaaagaggctacagaaagggttgaaagaaatctcagaattgtatattattggaaggcca
gacatgacagttgtcgcatttggatctaacaatctggacatattcgaagttaatgatatt
atgtcatctaaaggttggcacctcaatgcgttgcaaagacctaacagcatacatatctgc
atcacccttcaacatgtgccagttattgatggctttctaaaggatttgaaagattccgta
cagactgtgaaaaaaaatcctggtccagtaagtggggggcttgctccaatatatggtgct
gcaggaaagatgccagatagaggcatggttggagacttgctagtggattttatggatagt
tcgtgctga
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