KEGG   Daucus carota (carrot): 108196446
Entry
108196446         CDS       T05350                                 
Name
(RefSeq) signal recognition particle subunit SRP54 2
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03060  Protein export
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    108196446
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:dcr02044]
    108196446
Enzymes [BR:dcr01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     108196446
Secretion system [BR:dcr02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   108196446
  Eukaryotic Sec-SRP protein
   108196446
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N cobW nSTAND3 AAA_33 AAA_19 CLP1_P MMR_HSR1 ResIII Fe-ADH AAA_17 nSTAND_NTPase7 nSTAND_NTPase5 Zeta_toxin AAA_22 AAA_16 APS_kinase CbiA
Other DBs
NCBI-GeneID: 108196446
NCBI-ProteinID: XP_017219231
UniProt: A0AAF0XNW9
LinkDB
Position
7:33659781..33665687
AA seq 501 aa
MVLQQLGGSITRALQQMSNATIIDEKVLNECLNEITRALLQSDVQFKLVRDMQTNIKKIV
NLDDLAAGHNKRNIIQKAIFNELCKILDPGKPAFAPKKGKPSVVMFVGLQGSGKTTTCTK
YAFYHQKKGWKPALVCADTFRAGAFDQLKQNATKAKIPFYGSYMESDPVKIAVEGVERFK
KENCDLIIVDTSGRHKQEAALFEEMRQVSEATKPDLVIFVMDSSIGQAAFDQAQAFKQSV
AVGAVIITKMDGHAKGGGALSAVAATKSPVIFIGTGEHMDEFEIFDVKPFVSRLLGMGDW
SGFMDKIHEVVPMDQQPELLQKLSEGNFTMRIMYEQFQNILKMGPIGQVFSMLPGFSAEL
MPKGREKESQAKIKRYMYMMDSMTNEELDSTNPKLMNESRIMRIARGSGRQVRDVMEMLE
EYKRLAKIWSKMKGLKIPKKGEMSALSRNMNAQHMSKVLPPQMLKQIGGMGGLQNLMKQM
GGMGGMPGAKDMMGMFGGGEN
NT seq 1506 nt   +upstreamnt  +downstreamnt
atggtgctgcaacaattaggggggagcatcacgcgtgctctccagcagatgagcaacgcc
acaatcatcgacgagaaagttcttaatgaatgtcttaatgaaatcactcgcgctcttctc
cagtctgatgttcaattcaagctcgttcgtgatatgcagaccaatatcaagaagattgtc
aatctcgatgatctcgctgctggtcataacaagcggaatattattcagaaggctattttt
aatgagttgtgtaagatattggatcctgggaagccggcttttgctccgaagaaagggaag
ccgagtgtggttatgtttgtcggtttacaaggttctggaaaaaccactacgtgtacaaaa
tatgcattttatcatcaaaagaagggctggaaaccagctttagtttgtgcggatacattc
agagctggtgcttttgaccaattgaagcagaatgctaccaaagctaaaattcctttctac
ggaagctacatggagtcggatcctgttaaaattgcagtggaaggtgtagaaagatttaaa
aaggaaaattgtgatcttataattgtggataccagtggacgccacaaacaggaagcagct
ctttttgaagagatgcggcaagtttcagaagcaacgaaaccagatcttgtaatctttgtt
atggatagcagtattggtcaagctgcttttgatcaagcgcaagcatttaaacaaagtgtt
gcagttggagctgtaattattacaaagatggatggacatgcaaagggagggggtgctctt
agtgcagttgcagcaaccaaaagtcccgtcatattcattggaactggagaacatatggat
gagtttgaaatatttgatgttaaaccatttgtgagccgtcttttgggcatgggtgattgg
tctggatttatggacaagattcatgaagttgttcccatggatcagcagcctgagcttctg
cagaagctttcagaaggaaactttaccatgaggattatgtatgagcaatttcagaacata
cttaaaatgggtcccattggccaggttttttctatgcttcctggatttagtgcggagttg
atgccaaaaggccgtgagaaggaaagtcaggcaaagattaaacgctacatgtatatgatg
gactcaatgactaacgaagagttggatagtactaatccaaagctcatgaatgaatctcga
atcatgaggatagcaagaggatctggtcgtcaagtaagagatgtaatggagatgttagag
gagtacaaacgattggccaagatatggagtaagatgaagggccttaagattccaaagaaa
ggagagatgagtgcgttatcgagaaacatgaatgcgcagcatatgagcaaggtccttcct
ccacagatgctgaagcagattggtggtatgggtggcttacagaatttgatgaaacaaatg
ggtggtatgggtggtatgcctggtgctaaagacatgatgggtatgtttggaggcggagag
aattga

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