Daucus carota (carrot): 108196465
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Entry
108196465 CDS
T05350
Name
(RefSeq) serine/arginine-rich splicing factor RSZ22 isoform X1
KO
K12896
serine/arginine-rich splicing factor 7
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108196465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108196465
Spliceosome [BR:
dcr03041
]
Common components
Common spliceosomal components
SR proteins
108196465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_7
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
108196465
NCBI-ProteinID:
XP_017219251
LinkDB
All DBs
Position
7:11176736..11181178
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AA seq
186 aa
AA seq
DB search
MSRVYVGNLDPRVSERELEDEFRVYGVLRSVWVARRPPGYAFVEFDDSRDAHDAIKELDG
KNGWRVELSHNSKGGGGGRGGGRGGRGGGEDSKCYECGEPGHFARECRLRIGSRGLGSGR
RRSISPRRRRSPSYGRRSYSPRYSPRGRRSPRRYSISPPPRRGRSISRSPPPYRRARRDS
PYANGI
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgggtttatgttggaaatcttgacccacgagtatcagagagagaacttgaagat
gagttccgtgtctatggcgttttgagaagcgtgtgggttgctcggagaccacctggttat
gcttttgttgagtttgatgatagcagggatgctcatgatgctattaaggaattggacggg
aagaatggctggcgtgtggagctgtcacacaattcaaagggaggtggtggaggccgtggt
ggtggccgtggtggacgaggtggtggtgaggactcaaagtgctacgaatgtggagagcct
ggtcactttgctagagagtgtcgcttgcgaattggttcaagaggcctgggaagtggacgc
cgtcgaagtattagtcctagacgtcgcaggagtccaagctatgggcggaggagctatagc
ccacgttacagtccacgtggaaggaggtcaccaaggcgttacagcatttctcctcctcct
cgccgtggtaggagcattagcagatcccctcccccatatcgccgtgctcgccgtgattca
ccctatgctaatggaatataa
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