Daucus carota (carrot): 108196487
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Entry
108196487 CDS
T05350
Name
(RefSeq) long chain acyl-CoA synthetase 6, peroxisomal
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
dcr
Daucus carota (carrot)
Pathway
dcr00061
Fatty acid biosynthesis
dcr00071
Fatty acid degradation
dcr01100
Metabolic pathways
dcr01212
Fatty acid metabolism
dcr04146
Peroxisome
Module
dcr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
108196487
00071 Fatty acid degradation
108196487
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
108196487
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
dcr01004
]
108196487
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108196487
Enzymes [BR:
dcr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
108196487
Lipid biosynthesis proteins [BR:
dcr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
108196487
Exosome [BR:
dcr04147
]
Exosomal proteins
Exosomal proteins of breast milk
108196487
Exosomal proteins of breast cancer cells
108196487
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Apo-VLDL-II
Motif
Other DBs
NCBI-GeneID:
108196487
NCBI-ProteinID:
XP_017219276
UniProt:
A0AAF0XI24
LinkDB
All DBs
Position
7:12594859..12606180
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AA seq
696 aa
AA seq
DB search
MDSPAQRRIQAIQQHLISSQDEDYQASSLRPNETAGEFVLEQGYSVILPEKLETGKWNVY
RSVLSPMKLVSEFPNNPEIRTLHDNFTHSAKIFRDYKYLGTRVRVDGTVGDYKWMTYGEA
AAARSAIGSGLVSHGIPKGSCVGIYFINRPEWMIVDHACSAYSYISVPLYDTLGPDAVQF
IVNHATVQAIFCVPQTLNVLLSFLSEMPTVRLVVVVGGVDEKIPSLPSTAGVEIVSYTKL
ISQGQSNLHPFCAPNPADTATICYTSGTTGTPKGVVLSHGNLIANVAGATYSMQFTTSDI
YISYLPLAHIYERFNQILVAYYGGAVGFYQGDNLKLLDDMAVLRPTVFCSVPRLFNRIYA
GITNAVKASGGLKERLFNVAYNAKKQAVLSGKTPSPMWDRLVFNKIKEKLGGRIRHIVSG
ASPLSPDVMEFLRVCFGQVIEGYGMTETACVISALDKDDFSIGHVGAPSPACEVKLVDVP
EMNYTSDDQPHPRGEICVRGPIVFQGYYKDEVQTREVIDEDGWFHTGDIGLWLPGGRLKI
IDRKKNIFKLAQGEYIAPEKIENVYSKCKFVAQCFVYGDSLNSSLVAVVCLDPDVFKAWA
LAQGFKPENLEQLCKDPRARAAVLADMEAVGKEAQLRGFEFAKAVTLVLEPFTLENGLLT
PTFKIKRPQAKAYFAKAITDMYAEIAASDPSSQKLL
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atggattcacctgctcaacgtcgcattcaagctattcaacaacacctcatctcctcccaa
gatgaagattaccaagcttcgtcgctccggcctaatgagaccgccggcgagttcgtcctc
gaacaaggatacagtgtcatccttcctgaaaaactggagaccggaaaatggaacgtatac
agatctgttctatctcctatgaagcttgtgagcgaatttcctaataatcctgaaatccgt
actttgcatgataattttacgcactcggcaaagatattccgggattataagtatttgggt
acacgagttcgagtggatggaacagttggagattacaagtggatgacctatggggaagca
gctgctgcaaggtcagctattggttctgggctagtgtctcatgggataccgaaggggtca
tgtgtagggatatatttcatcaacagaccggagtggatgatagttgatcatgcctgctca
gcctattcttacatctccgttcctttatacgacacccttggtcctgatgctgtccaattt
atagtcaatcatgcaactgtgcaagctatattttgcgtgccacagacattgaatgttttg
ctaagcttcctgtctgagatgcccaccgtacgtcttgttgtggtggttggaggggtggat
gagaagattccatcacttccatcaacagctggagttgaaattgtttcatatacaaagtta
attagccagggccaaagcaacctccatcctttctgtgcaccaaaccctgctgatactgct
acaatttgttataccagtggtacaactgggacaccaaagggagttgtcctatcacatggt
aatttgattgcaaatgttgctggtgcaacttacagtatgcaattcacaacctcagatatt
tacatatcatatctgcctttagcccacatctatgaacggtttaaccagatactggtggca
tattatggaggtgcagttggattctaccaaggagacaacctaaagctactggatgatatg
gcagttctaagacccaccgtcttctgcagtgttccacggctgtttaataggatatatgct
ggcatcacaaatgctgtgaaggcatctggtggtttaaaggagaggttattcaatgttgcc
tacaatgccaagaagcaagcggtactcagtggcaagactccatctcccatgtgggacagg
ttggttttcaataaaataaaagaaaaacttggaggacgaattcgtcatatcgtttcaggt
gcatcacctttgtctcctgatgtcatggaatttctgagagtttgctttggccaagtcata
gaaggatatggaatgacagagacagcttgtgttattagcgccttagataaggatgatttc
tcgattggccatgttggcgcccctagtccagcatgcgaggtaaagcttgtagatgttcca
gaaatgaattatacatccgacgatcagccccatccacgtggtgagatctgtgtacggggt
cccatagtatttcaaggctactacaaagatgaagtgcaaacaagagaagttattgatgaa
gatggatggtttcacactggagacatagggctgtggctacctggaggccgcttaaaaatc
atagacaggaagaagaacattttcaagttggcacaaggagaatatatagctcctgagaaa
attgaaaatgtatattcgaaatgcaagtttgttgcacagtgttttgtctatggtgacagc
ttgaactcctcactggttgcggttgtctgcttggacccagatgtctttaaggcttgggct
cttgctcaaggtttcaagcctgagaacttggaacaactgtgcaaagacccgagagcaagg
gcagccgttctggctgacatggaggctgtcggcaaagaagctcagttgagaggctttgaa
tttgcaaaagctgtgactttggttcttgaaccttttactttggagaatggtttgctgaca
ccaacatttaagatcaagagacctcaggcgaaagcatactttgcaaaagcgataacagat
atgtatgcagaaattgccgcatctgatccttcttctcagaagctgttgtaa
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