Daucus carota (carrot): 108196537
Help
Entry
108196537 CDS
T05350
Name
(RefSeq) transcription initiation factor IIF subunit alpha
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108196537
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108196537
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
108196537
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
108196537
NCBI-ProteinID:
XP_063937499
LinkDB
All DBs
Position
7:complement(37965233..37971761)
Genome browser
AA seq
545 aa
AA seq
DB search
MSGDLVLNSVCCVCKTMAELYGSNCKHLTLCVSCGRSKAEKGAKCTECGAPITRLIREYN
VRACSSTDKNYFIGRFVSGLPNFSKKKNSEKWSIQKEGVQGRQLSDALKEKYKNRPWLLE
DETGQFQYHGVLEGAPSATYYLLMLQGKEFVAIPAGSWYNFNKVAQYKQLTLEEAEEKMK
NRRKTADGYERWMMKAANNGAAAFGEVEKFDDKESGGGGGRGRKKTTGDDEDEANVSDKG
EEDEEEESARKNRLGLNRKGGGGDDDEEGPRGGDFDFDDDDIEKGDDWEHEEIFTDDDER
VENDPEEREDLGPEIPAPPEIKQDEEDEEGEEKEGGLSNSGKELKKLLGRTNGLNESDAE
DDDDDDDDDEEDEILASPVLAPKQKDAPKEEPVDNSPLKPISAASARASSASKSAKGKRK
VSTDDAKAAAAVPSKKAKTENDVKPVKEEPVSASKKNVAKKGASSVPVESGSAVAGQPVT
EDEIRAVLTQEKPVTTQDLVAKFKSRLRSREDKDAFAAILRRISKIQKTTNGRSFVVLRE
MKPDA
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgatttggtgttgaactcggtgtgctgcgtgtgcaaaacgatggcggaattg
tacggaagcaactgtaagcacttgactctatgtgtctcttgtggaagatcgaaggctgag
aagggcgccaagtgtaccgagtgcggcgcgcccatcactcgcttgattagggaatataac
gtgcgggcctgctctagcaccgacaagaattatttcattggtagatttgtgagtggttta
ccaaatttttcaaagaaaaagaactctgagaaatggtctattcaaaaggaaggggtgcag
gggcgccaactcagtgatgcgttgaaggagaaatacaagaacagaccttggctcctagag
gatgaaacaggccaatttcagtaccatggtgtgcttgagggcgcaccctcagcaacatac
tacctactaatgctgcaagggaaagaatttgttgcaattccagctggatcatggtacaat
ttcaacaaagtcgcacagtacaagcagcttactctggaagaagcggaagagaaaatgaaa
aatagacggaagacagcagatggatatgaaagatggatgatgaaagctgcaaacaatggg
gctgctgcttttggtgaagtcgagaagtttgatgacaaagaaagtggaggtggtggggga
agaggacgtaaaaaaactacaggtgatgatgaggacgaagctaatgtctcggacaaggga
gaggaggatgaagaagaagagtccgcaaggaaaaatagactcgggcttaacaggaaaggt
ggtggtggtgatgatgatgaagaaggtccaagaggaggtgactttgattttgatgatgat
gatattgaaaaaggggatgactgggagcatgaagaaatattcacagatgacgatgaacgt
gtagaaaatgatcctgaggagcgggaagatttgggccctgaaattccagcacctccagaa
attaagcaggatgaagaggatgaagaaggtgaagaaaaggagggtggattgagcaactcc
ggtaaagagttgaagaaattgctgggacgaacaaatgggctaaatgaatctgatgcagag
gatgatgacgacgatgatgacgatgatgaggaagatgaaattttggcttcccctgtacta
gctccaaagcagaaggatgctcccaaagaagaacctgttgataacagtcctttgaaacct
atttctgcagcatctgcccgcgcctcttcagcttctaagtctgcaaagggaaagaggaag
gtttctactgatgatgccaaggcagctgcagctgtaccctccaaaaaagcaaagacagaa
aatgatgtcaaacctgtgaaggaagaaccagtctctgcttcaaaaaagaatgtggctaaa
aaaggtgcatcatcggtacccgttgaatctgggtcagcagtagctggacaacctgtcacg
gaagatgaaatcagggccgttttgacacaggaaaagcctgtgaccacacaggatcttgtt
gccaaattcaaatctagactaagatccagagaggacaaagatgcttttgctgctatacta
aggagaatttcaaagatacagaaaaccaccaacggaagaagctttgtagtgttgagagaa
atgaaacctgatgcttag
DBGET
integrated database retrieval system
