KEGG   Daucus carota (carrot): 108196578
Entry
108196578         CDS       T05350                                 
Name
(RefSeq) protein decapping 5 isoform X1
  KO
K18749  protein LSM14
Organism
dcr  Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108196578
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108196578
SSDB
Motif
Pfam: LSM14 FDF SM-ATX
Other DBs
NCBI-GeneID: 108196578
NCBI-ProteinID: XP_017219407
UniProt: A0A161Y340
LinkDB
Position
7:complement(4167639..4175203)
AA seq 602 aa
MAAESSRSNSAADSYVGSLISLTSKSEIRYEGILYNINTDESSIGLRNVRSFGTEGRKKD
GPQVMPSDKVYEYILFRGSDIKDLQVKSSPPVQQPIQTVPPINGDPAIIQSHYPHQLPTS
SNLPPASTMSLTDPGSHTLQTGQPGPNYQGNLPLYQPGGNMPWGNSPPLPSSTGGGLAMP
MYWPGYYAPPNGLPQMHQQSLLRPPPGLSVPPSMQQPMQFTGFNPSMPAGGLTLPEYPST
LLPASNSLLNLNSASLPSGLSPFPPLNLSSEPLPSFMQNKVPGAAIPLGSVSDSLPSAPP
LTSLKLDSSAVAPPISDKPIESPELPYQTISQPMASIGISASSVQTEKPSLVTPGQLLHH
SGTGVSSSQFLQTAHNPVPSSHSSQVAHKDVEVVQPSPRASLELPVPASNEAQPPLLPLP
QPHRTTQKPNGATYQNRQTNYRGRERGRGTRVSRPVMKFNEEFDFMAMNEKFNKDEVWGH
LGESSKSNLTEKEGDGNAGEESHFKDEDDTELPKSDVKPVYNKDDFFDTLSCKALDNQSN
NGRTRFSEQIKLDTETFGEYSSRYRGWRGGRGPNRGGRSRGGYYGRNGGNAGRGRGQNMS
SQ
NT seq 1809 nt   +upstreamnt  +downstreamnt
atggcggcggagagttcccgatccaattcggcggccgattcgtatgtgggcagcttgatt
agcttgacttccaaaagtgaaattagatatgagggcattctctataacatcaacactgat
gagtccagtattgggttgcgaaatgtaagatcatttggaacagaagggcgtaaaaaagat
ggcccacaagtgatgcctagtgataaagtttatgaatacattttgtttcgtgggagtgat
atcaaggatttacaggttaaatcatctccacctgttcagcaacctattcaaactgtacct
cccataaacggcgaccctgcaataattcagtctcactatccgcaccagttgccgacatct
tcaaacttgccacctgctagtaccatgtctttaacagatcctggttcgcacacactccaa
acaggacagcctggcccaaattaccaaggtaatctgcctctataccaaccaggagggaat
atgccctggggaaattcaccccctcttccgagttcaactggtggtggacttgcaatgcca
atgtattggccaggatattatgccccaccaaacgggcttccccaaatgcaccaacaatct
ttgctccgaccaccacctgggctttctgtgcctccttcaatgcagcagccgatgcagttc
actggtttcaacccttctatgccagctggaggtttaaccttgccagagtatccttcgact
ttacttcctgccagcaatagtttgctaaatttgaactctgcatctttaccttctggctta
tctccttttccacccttgaatttatcatccgaacccctacccagctttatgcaaaataag
gtccctggcgctgcaattccattagggtcagtaagtgacagcttgccgtcagcacctcca
ttaacttctttgaaattagattcgagtgctgttgcacctccgatctctgacaagcctata
gaaagtccagagttgccatatcaaacaatttctcagcccatggcatctattggaatatct
gccagttcagttcaaacagaaaagccgtcactcgtaaccccgggacaattgttgcaccac
agcggaactggcgtctcttcatctcagtttttgcaaactgctcataacccagtcccttca
tctcattcgtctcaagtagctcataaagatgttgaagtggttcaaccatcacctcgagca
tccttagagttaccggttccagcttcaaatgaagctcagccaccgcttttgccattaccg
caaccccatcgcactacccaaaagcctaatggagctacttatcaaaatcgtcagaccaac
tacagagggcgtgaaagaggaagaggaacgagggtttcaaggccggtgatgaaatttaat
gaggaatttgacttcatggcgatgaatgaaaaatttaacaaggatgaagtatggggtcat
cttggtgaaagcagcaaatccaatttgacggaaaaagaaggggatggaaatgctggggag
gaaagtcactttaaagatgaagatgatactgaattacccaagtcagatgtgaagcctgtt
tataacaaggacgatttttttgacaccctctcttgcaaagctcttgataatcaatcaaac
aatggccgtactaggttctctgaacagatcaagttggacactgagacatttggagaatat
tcttcaaggtaccgtggctggcgtggtgggcggggtcccaatcgaggtggccgttcgcga
ggaggttattatggaagaaacggcggcaatgctgggaggggacgtggtcagaatatgtcg
agtcagtga

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