KEGG T05350: 108196605

Daucus carota (carrot): 108196605

Entry

108196605         CDS       T05350

Name

(RefSeq) glycine-rich RNA-binding protein 3, mitochondrial

K12741

heterogeneous nuclear ribonucleoprotein A1/A3

Organism

dcr Daucus carota (carrot)

Pathway

dcr03040

Spliceosome

Brite

KEGG Orthology (KO) [BR:dcr00001]
09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    108196605
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108196605
   03041 Spliceosome [BR:dcr03041]
    108196605
Messenger RNA biogenesis [BR:dcr03019]
Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     108196605
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     108196605
Spliceosome [BR:dcr03041]
Common components
  Common spliceosomal components
   hnRNP proteins
    108196605

SSDB

Motif

Pfam:

RRM_1 RRM_7

Other DBs

NCBI-GeneID:

108196605

NCBI-ProteinID:

XP_017219447

UniProt:

A0A164U2G9

LinkDB

Position

7:complement(32939456..32946758)

AA seq 256 aa
MALASRLGNMLKQASSKHVSIESSLSNLSLCQAVRFMSSSKLFVGGLPWSIDDGSLREEF
AQHGEVTEARVIIDQMTGRSRGFGFVTYTSSEEASSAKQAMDGQELQGRRVKVDFATDRP
RQGGFGGGSYGGGNRYGGGNNYGGGGNNYGGGYGNYGGGGRGGGNNYGGGYGSYADGGGN
VGSYGGGNSGGYGGGNSGGYDVAGSGDGFSAAGGSSGEFSDTGFSGTGSGGTTGNDGLSL
DGADGGEPEAIENTRN

NT seq 771 nt +upstreamnt +downstreamnt
atggctctggctagcagacttggaaatatgcttaagcaggcaagctctaagcatgtcagc
atagaatcgtctctttcaaatttatcactttgccaggcagtaagatttatgtcatcttcc
aagctatttgttggaggtcttccttggagtattgatgatggaagtttaagagaagaattt
gcacaacatggggaggtcacagaagcaagggtcatcattgatcagatgactggtagatcc
agagggtttggttttgttacttatacttcaagtgaagaggcgtcaagtgccaagcaagcc
atggacgggcaggaacttcaagggcgaagggtaaaggtcgattttgcaacagacaggcct
cgtcaaggaggttttggtggtgggagttatggtggtggtaacaggtatggagggggtaac
aactatggcggagggggtaacaattatggcggaggatatggaaattatggcggtggcggc
cgtggagggggcaacaactatggtgggggatatggaagctatgctgacggtggaggcaat
gtcggaagttatggtggcggaaatagtggcgggtacggtggcggaaatagtggcgggtat
gatgttgctggtagcggtgatggattttctgctgcgggaggttccagcggtgaatttagt
gacactggcttttcaggaaccggatctggcggtactaccggtaacgatggtctgagtctg
gatggagctgatggtggggagcctgaagccattgaaaacacgagaaactga

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