Daucus carota (carrot): 108196608
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Entry
108196608 CDS
T05350
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 13
KO
K14805
ATP-dependent RNA helicase DDX24/MAK5 [EC:
5.6.2.7
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
dcr03009
]
108196608
Enzymes [BR:
dcr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108196608
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Helicases
108196608
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
Motif
Other DBs
NCBI-GeneID:
108196608
NCBI-ProteinID:
XP_017219450
UniProt:
A0A164T7H7
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All DBs
Position
7:14496927..14508309
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AA seq
806 aa
AA seq
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MSSLQSKTLTKRKKPRRVSRVDSEQLDRIDSLPWHSSLPEFTSNDDTFSIVAGTNELDGG
FLSLEEIDESAYASEIAKFEGGGGFKNEVKPKKRKASEGDNVGGDVNEGFADVSNEDESG
GEDEIEDKEVKITNKKTKKRNRKKKKVEEKKEIEDVVAVTDVPEEKDTFDDGEFYAWNEL
RLHPLIMKSIYRLKFKEPTPIQKACIPAAAHQGKDVIGAAETGSGKTLAFGLPILQRLLE
EREKADNISEENGDAGSKIAARGFMRALIITPTRELALQVHDHLKEVAKDTNIRVVPIVG
GMSTQKQERLLKARPEIVVGTPGRLWELMSGGQIHLVEMHSLSFFVLDEADRMIENGHFH
ELQSIIDMLPGVMESAEGRSSHTQSCVTVSSFQRKKRQTLVFSATIALSADFRKKLKRGS
VKSKLNDDLNSIENLSQRAGMRPTAAIFDLTNASIMAGRLEESFIECREEDKDAYLYYIL
AVHGHGQTIVFCTSISALRHISSILLILGVNVYTLHGDMQQRARLKAIDRFRENKDGILV
ATDIAARGIDIPGVRTVVHYQLPHSAEVYVHRSGRTARASADGCSIGLISPNDTTKFAAM
CKSFSKESFKRFPVELSYMPEVLKRMSIARQIDKVMRKESQEKASKGWLQRNAESVEMVV
EEDDSEEERVNICRQKKATSVHLKKLQQELKVLLSRPLQPKTFSHRYLAGAGISSLLQDQ
FEELARHKQDDTKNSGHGNSKMVVIGQSCVEPLEALRSSGHEVHMDFKGGAERRKRLENL
RKKRKDEKRRKHDQKRKEKKRLKGLE
NT seq
2421 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctcttcaatctaaaaccctaaccaagaggaagaaacctagacgagtttcccga
gtcgactcggaacaactcgaccgtatcgactcgctcccttggcactcttctcttcccgag
ttcacttccaacgacgacaccttctctatcgtcgccggcactaacgaactcgacggaggc
tttttgtcgctcgaagagattgatgagtcggcttatgcgtcggagattgctaaatttgaa
ggaggtggaggatttaaaaatgaggtgaagccgaagaagcggaaagcgagtgagggtgat
aatgtaggtggtgatgttaatgaaggctttgctgatgtttcgaatgaagatgaaagtggc
ggtgaggatgaaattgaggataaagaagtgaagattacgaataagaaaacgaagaagagg
aataggaagaagaagaaggtcgaggagaaaaaggagattgaggacgttgtggcagttacc
gatgttccagaagagaaggatacgtttgatgatggtgaattttatgcatggaatgaactg
agacttcatcccttgatcatgaaatctatatacaggcttaagttcaaggaacctacaccg
atacagaaagcttgcattccggcagctgcacatcaaggaaaggatgttataggtgccgca
gagacaggatctggaaagacactagcatttggtctgcctattctgcaacgtcttctggaa
gaaagagaaaaggctgataatatttctgaagaaaatggagatgcgggttcaaagattgct
gcaagaggttttatgcgggctctcattattactcccactagagagcttgcgcttcaggtc
catgatcatctgaaagaagtagccaaagataccaatatcagggtcgttcctattgttggt
gggatgtcaacacaaaaacaggaaagacttctgaaagcaaggcctgagattgttgttggg
actccgggaaggctttgggagcttatgtctggtggacagattcatcttgttgagatgcat
tctttgtctttcttcgtgctggatgaggctgatcggatgattgaaaatggccactttcat
gagttgcagtccataatagacatgttgccaggggtaatggaatctgctgaagggcgctct
tctcatacacaaagttgtgttactgtgtcaagctttcaaaggaaaaaaaggcagacgctt
gtattttctgcaactattgccctttctgctgatttccgcaagaagctaaagcgtgggtca
gtaaaatcaaagctcaacgatgatctgaattcaatagaaaatttgtctcaacgagcagga
atgagacctactgctgccatttttgatctgactaatgcctcaattatggcgggtagactc
gaggagtcatttattgaatgccgtgaggaagataaagatgcctatctatattacattttg
gctgttcatggacatggacaaacaattgttttctgcacatcaatttcagccctacgtcat
atttcttccatactgcttattcttggtgtcaatgtttatactcttcatggtgatatgcag
cagcgagctcgtttgaaggctatagaccgttttcgagaaaataaggatggtatacttgtt
gctactgatatcgcagcaagaggcattgatatacctggtgtccggaccgtggttcactat
caacttccccattcagcagaagtctatgtccatagaagtggaagaaccgccagagcctct
gcagatgggtgcagcattgggctgatatccccaaatgatactacaaaatttgctgctatg
tgcaaatcattttcaaaggaaagcttcaagcgatttcctgtagaactctcatacatgcca
gaggttctaaagcgcatgtccattgcacgtcaaattgacaaggttatgcgaaaggaatcc
caggaaaaggcgagcaaaggctggttgcaacggaatgctgaatcagttgaaatggttgtg
gaagaggatgacagcgaggaagaaagagtgaatatttgcaggcaaaagaaagcaacttca
gtgcatctaaagaaacttcaacaggagctcaaagtgctactttcgcggccgctgcaaccc
aaaacattctcacatcgctatttagctggggctggtatatcctcccttcttcaagatcaa
tttgaggaattagctagacacaaacaggatgacaccaagaactctggacatggcaactcc
aagatggttgtcataggtcagagttgcgtggaaccgcttgaagcacttagaagttcgggt
catgaggtgcacatggatttcaaagggggcgcagaaagacggaaaagattagaaaaccta
agaaagaagagaaaagatgagaaaagacgtaaacatgatcagaagagaaaagagaagaaa
aggctaaaagggttggagtaa
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