KEGG   Daucus carota (carrot): 108196612
Entry
108196612         CDS       T05350                                 
Name
(RefSeq) small ribosomal subunit protein RACK1
  KO
K14753  guanine nucleotide-binding protein subunit beta-2-like 1 protein
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03010  Ribosome
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    108196612
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:dcr03019]
    108196612
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:dcr04147]
    108196612
Messenger RNA biogenesis [BR:dcr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Stress granule specific factors
     108196612
Exosome [BR:dcr04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   108196612
  Exosomal proteins of colorectal cancer cells
   108196612
  Exosomal proteins of bladder cancer cells
   108196612
SSDB
Motif
Pfam: WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_CDC20-Fz WD40_Gbeta WD40_WDHD1_1st EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR36-Utp21_1st Beta-prop_WDR90_POC16_2nd NBCH_WD40 DSE1_N Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_EML Beta-prop_TEP1_C WDR90_beta-prop_4th ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_SPT8 WD40_MABP1-WDR62_1st Beta-prop_NOL10_N Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_Aladin Beta-prop_HPS5 TRM82_WD ASA1 Beta-prop_WDR41 CFAP251_N Beta-prop_IFT140_1st Beta-prop_DCAF12 Beta-prop_NWD2_C Beta-prop_WDR75_2nd PROPPIN Beta-prop_ACSF4 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_Vps41 Tricorn_2nd eIF2A DUF7899 Beta-prop_Nup120_160 Cytochrom_D1 Beta-prop_RSE1_2nd Beta-prop_NUP159_NUP214 Beta-prop_pof12
Other DBs
NCBI-GeneID: 108196612
NCBI-ProteinID: XP_017219461
UniProt: A0A164U1E3
LinkDB
Position
7:31701523..31703667
AA seq 329 aa
MAESLTLKGTLRAHTDWVTAIATPIDNSDMIVTSSRDKSIIVWKLTKEDKSYGVAQRRLT
GHSHFVQDVVLSSDGQFALSGSWDGELRLWDLSNGTTARRFVGHTKDVLSVAFSIDNRQI
VSASRDRSIKLWNTLGECKYTIQDGDAHSDWVSCVRFSPNNVQPTIVSASWDKTVKIWNL
SNCKLRSTLAGHNGYVNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLDASSIIHAL
CFSPNRYWLCAATESSIKIWDLESKSIVVDLRIDLKAEADMAAEGNATQTNAGKNKVIYC
TSLSWSADGSTLFSGYTDGVVRVWGIGRY
NT seq 990 nt   +upstreamnt  +downstreamnt
atggcggaatcactcaccctcaagggcactctcagggctcacaccgactgggtcaccgca
atcgccaccccaatcgacaactccgacatgatcgtcacctcgtcccgcgacaaatctatc
atcgtctggaaactcaccaaggaggacaagtcatacggcgtcgctcagcgtcgtttaacc
ggccactcccatttcgtccaggacgttgttctctcttccgacggtcagttcgcgctttcc
ggctcctgggacggcgagctccgtctgtgggacctctccaacgggaccaccgcgcggcgc
ttcgtgggccacactaaggacgtgctgtccgtggcgttctcgattgataaccgtcagatt
gtgtcggcgtctcgtgaccgttcgattaagctgtggaacactttgggggagtgcaagtat
acaattcaggatggtgatgcgcattctgattgggtgagctgtgtgaggttcagcccgaat
aatgtgcagcccacgattgtttcggcttcgtgggataagactgtgaagatttggaatttg
agtaattgcaagctcaggtccactcttgctgggcataatggttatgtgaataccgttgcg
gtgtctcctgatggttcgctttgtgctagcggtggcaaagacggtgtgattctcttgtgg
gatttggctgagggcaagaagctttactctctcgatgcttcttcgatcatccatgctctt
tgctttagtcctaataggtactggctgtgtgctgctaccgagtcgagcattaagatttgg
gatctcgagagcaagagcattgttgttgatttgaggatcgacttgaaggcagaggctgat
atggctgctgagggcaatgctactcagacaaatgctggcaagaataaggttatttactgc
acaagtttgagctggagtgctgatggaagcaccttgttcagcggatacacagatggtgtt
gtcagggtctggggcatcggacgttactag

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