Daucus carota (carrot): 108196643
Help
Entry
108196643 CDS
T05350
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease 2 isoform X1
KO
K10772
AP endonuclease 2 [EC:
3.1.11.2
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108196643
Enzymes [BR:
dcr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
108196643
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
108196643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Zn_ribbon_GRF
Motif
Other DBs
NCBI-GeneID:
108196643
NCBI-ProteinID:
XP_017219511
LinkDB
All DBs
Position
7:38012729..38017773
Genome browser
AA seq
694 aa
AA seq
DB search
MKIVTYNVNGLRPRIQQFGSLLKLLTSLDADIICLQETKLAKHDLRADMVWADGYESFFS
CTRARIGYSGVATFCRVKCAFSSCEVALPVDAEEGFTGLLENSRGFGDGKDERVVEGLEE
FSKDELLKVDSEGRCIITDHGHFVLFNIYGPRADPDDAERIQFKHNFFKILQKRWDAILR
QGRRLIVVGDINIAPAAIDRCDAKPDFEKNEFREWFRSLLVENGGPFADVFRAKHPERKE
AYTCWSTSSGAEIFNFGSRIDHILSAGKCLHEHSTDGHDFLTCHVRECEILTQFKRWQSG
NTTGRWKGGAGIKLKGSDHAPVCMSLDEIPIISQHNTPLLSTRYCPQVEGCQQTLVSMLA
RRQTAEHLKSNGQSNSSLVTDTKVSMKRSSDNAAAPDLSLDGLVDSSHMKQRDNALESVE
CSQSSPNEASWSKMLCLSSSPDKPISRVQSKKKPKQSQGSQLSLRSFFQKSSVPIDGINS
SGTSDKTGDAPASDQFSKGDSMRYDEMNTKTDSVSKINMSLQDHAPADSLCSTVEEKRNV
AVAEWQRIQEVMQSSIPLCKGHSEPCVSRIVRKSGPNLGRKFFVCARAEELNFGSCRGLH
RILKQIVITSNGRLQNLITKQEDNDWQYNVFYLWGSTKSRNNSTADHLIRSLLKFPSLLI
SSLTDLFPISVCSTLFCRMQELDFPPGLSFKTEM
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagtaacttacaacgttaatgggttgagacctcgtattcaacagttcggttct
cttctcaaattgctcacttctcttgatgctgatatcatctgccttcaggagacaaaacta
gcaaaacatgacttgagagcagatatggtgtgggcagatggatatgagtctttcttttct
tgcaccagagcccgtatcggttattctggtgttgcgacattttgccgagtaaaatgtgct
ttttcaagctgtgaagtagctttgccggttgatgcagaggaaggatttacgggtctgctt
gagaattctcgagggtttggagatgggaaagatgagcgtgttgttgaagggctagaagag
ttttctaaagatgaacttcttaaagttgatagtgaaggtcgctgcattatcactgatcat
ggacattttgttttattcaacatatatgggcctcgggctgatcctgacgatgctgaaaga
atccaatttaagcataattttttcaagatcttgcagaaaagatgggatgcaatcctccgc
caaggaagaaggctgattgtcgttggtgatatcaacattgctcctgctgctatagatcgt
tgtgatgcgaaaccagattttgagaaaaatgagtttagagaatggtttagatctttgctt
gtagaaaatggaggcccatttgctgatgtatttcgagcaaaacatcccgaaaggaaagaa
gcatatacttgctggtcgacaagttcaggtgctgagatttttaattttggatcaagaatt
gaccatattctcagtgctgggaaatgtctacatgagcacagtacagatggtcatgacttt
ttaacttgccatgtcagggagtgtgagatattgacacagtttaaacggtggcaatctgga
aatacaacaggcaggtggaaaggaggggcaggtataaaattgaaggggtctgaccatgct
cctgtctgtatgagcctcgatgagatcccaattatatcacaacacaatacccccttgtta
tctacaagatattgtcctcaggttgaagggtgtcaacaaactcttgtatcaatgctagca
agaagacaaacagctgagcatttgaaaagcaatggacagtccaattcctccctggtcaca
gatactaaagtgagcatgaaaagatcatctgataatgctgctgcaccagacttgtctctt
gacggattggtcgattcttcacatatgaaacaaagagataatgctttagaatcagttgag
tgctcccaaagttctcctaatgaagcttcttggagcaagatgctttgtttaagcagcagt
cctgataaaccaatttctcgtgtacaaagcaaaaagaaaccaaaacaaagtcaggggtcc
cagctctcacttcgatcgttttttcagaagagttcagttcctattgatggcataaacagc
agtggtacatctgataaaacaggagatgctccagcttctgaccaattctctaaaggagat
tccatgaggtatgatgaaatgaacacaaaaacagactcggtttcaaagataaatatgtct
cttcaagatcatgctccggcagattcattatgttctacagtagaggaaaagagaaatgtt
gctgtagctgaatggcaaaggattcaagaagtcatgcagagcagcatacctctgtgtaaa
ggccacagtgaaccttgtgtctctcgaattgtcagaaaatctggtcctaatctgggtcgt
aaattcttcgtctgtgctcgtgctgaggaattgaattttggttcatgcaggggcctgcat
cgaatcctgaagcaaattgtaattacttcaaatgggcggcttcaaaatctaatcacaaag
caagaggacaatgattggcagtacaatgttttttacttatggggttctaccaagtcacgt
aataactctactgctgaccatttgataagatctttgctgaaatttccttccctcttgata
agtagtttgaccgacctctttccgatctctgtctgttctacacttttttgtaggatgcaa
gaactagattttcctccggggctcagtttcaaaacggaaatgtga
DBGET
integrated database retrieval system
