Daucus carota (carrot): 108196691
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Entry
108196691 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108196691
KO
K19022
AP-5 complex subunit beta-1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108196691
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
108196691
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
108196691
NCBI-ProteinID:
XP_017219580
UniProt:
A0AAF0XG66
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All DBs
Position
7:1419695..1426204
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AA seq
1126 aa
AA seq
DB search
MSSLKPLSPQEWESLIDDYQTNSTQRLQKWASLNYTGISLLDLSLSSLSRKDFSLSVKLN
LIVFIEEYLQSCFEEDQESEACSLGLTRLVDSLRGVVQAPIDGVSVTLLLKEQFLVCVTS
VFVSCVIGIDGNLGGQFVKQLEGLIELLFSVINRPNHGVDRQTRAVGCECLRELERACPC
LLAQVAGNLWSLCQSERTHAAQSYVLLLAQVIHGVVVSGANVSIVNSSMPLVPYNVPEFL
INDGGLGKEFSDSNYKEFRRVMAFLLEWPQYMTPFGLLEFMTLIMTLAAVLELQTSLLKV
QFSGLIYTYDPLLCHTFLGMYSRFLDAFDGQENEIANRLVLISREAQHSLVFRLLALHWL
QGVIELVSSKEVGKKKIVVKMSLSFYPSVFDPLALKSLKLDLLAYSSILLDTDRSKVMIN
MKGELGLDSSNVVSLFKDGLVSVSSFNWLPPWSTETAVAFRAFHKFLIGASLHYDTDSSS
AKVPKDSTIFHTVQNMLVEMALEFQGLVPVIVAFIDRLLACYKHRWLGEHLLQTFDKSLV
SKLKVDYRLVSYFPLFDRIAGTDTVPPGGIIELFAKLMMFLVEKHGPDTGLKSWSQGSKV
LGMCRTMLLHHHSSRLFLGLSRLLAFISLYFPDLEVRDSARIYLRLLICVPGKRLRHILN
FGDRVPGISPFSDQAPQILHDPKKSKTISSYIHLERVFPLLVKQSWSLSLPTLSFGSGKP
SYIESIQDSEPPPEQTEVDSQNLSETERVYHPQEPLRVMDSKVSEIVGILRQHFLSIPDY
RHMAGLKIRILCTLRFESEPFARTWGVNVPANGFNEEDSLPAIYATVLIFSSSAPYGIVP
SYHIPFLLGEPSRNASPVGQAGSQEIIPIEDKSQEEIRFKASVTIELEPREPVPGMIDVS
IESNTENGQIIRGQLQSITVGIEDMFLKAIIPEEVKGHAVSDYYFALFSALWEACGTSAS
TGRETFSLKGGKGVTAISGTRSVKLLEVPAQLVIEAVERHLAPFVVSIIGGPLVSIVKDG
GIISDIFWKDVDSDSSADVTTSGTNMDSGPLYLKYTEDEDDRGGHINVNKKNMGCFLILI
FLPPRFHLLFQMEVTDVATLVRIRTDHWPCLAYIDDYLEALFSAQR
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcactcaaacccctttcacctcaagaatgggagtctctcattgatgattaccag
accaactctactcagcgtctccagaaatgggccagtttgaactacactggaatctctctc
cttgacctctctctctcgtccctctcccggaaagatttcagtctctctgtgaaactcaat
ctcattgtgttcattgaggagtacttgcaatcttgctttgaagaagatcaagaatctgag
gcttgttcgttgggactgacccgtcttgtcgattcgcttcgtggggttgtacaagctccg
attgatggtgtttcagtgacccttttgctcaaagaacagttcttggtttgtgttacttct
gtttttgtgagttgtgtgattgggattgatgggaatttaggtgggcagtttgttaagcag
ttggaggggttgattgagcttttgtttagtgtgattaataggcctaatcacggggttgat
aggcagacaagagctgtgggttgtgagtgtttgagggagctggagagagcttgtccgtgt
ttgttggctcaagttgcggggaatttgtggagtttgtgtcagagtgagaggactcatgct
gcacaaagttatgttcttttgcttgctcaggtgatccatggcgttgttgtatcaggtgca
aatgtttctattgttaatagttcaatgcctttagtaccttataacgttccggagttttta
attaatgatggtgggttgggtaaagaattttcagattcaaattataaggagtttaggaga
gtaatggcctttttgcttgaatggccacagtatatgactccatttgggttgttggagttc
atgactttgataatgactttggcagcagtgttggaattgcaaacttcgttgttgaaggtg
caattctcaggactgatctacacgtatgatcccttgttatgtcatacttttttagggatg
tattctcgatttttagatgcttttgatgggcaagaaaatgagattgctaatcgcctagtg
ctaatatcaagagaagctcaacattctttggtttttcggttgcttgcgctacactggtta
caaggtgttattgaattagtgtcgagtaaagaagtcgggaagaagaaaattgttgtcaaa
atgagtttgagcttctacccatctgtatttgatccactagctctaaaatccttaaagctt
gacttgcttgcttatagctcaattttacttgatactgacagatcgaaagtaatgataaat
atgaaaggtgaacttggtttggactcaagcaatgtggtgagtttattcaaggatggtctt
gtatcagtatccagtttcaattggttacccccatggagcactgaaactgcagtggcgttc
cgtgctttccataagtttttgatcggtgcctccttacattatgatacagattcttcctct
gctaaagttccgaaagactccaccatcttccacactgtacagaacatgcttgtggagatg
gcattggagtttcagggattggttccagttatagttgcttttattgacaggttattagcc
tgttataagcacaggtggttgggcgagcatctgcttcagacttttgataaaagtttggtt
tcaaagctcaaggtagactatagattggtatcttacttcccattatttgacagaattgct
gggactgatacggtcccaccaggtggaataatagagctctttgccaaattgatgatgttt
cttgttgagaaacatggtccagacacagggttgaagtcctggtctcaggggagtaaagtt
cttggaatgtgtcgaactatgctgttacaccatcatagctctagactgtttcttggacta
tcccgtctcctggctttcatttccctatattttcctgacttggaggttcgtgacagtgcc
aggatatacctgcggttgctgatctgtgtaccaggaaaaaggcttaggcacatactgaac
tttggggaccgagttccaggtatttcaccattcagtgatcaggcacctcaaattttgcat
gatcctaagaagtctaaaaccatttcttcctacatccacctggaacgagtatttccgttg
ttggtcaagcagtcttggtccctgtctttgccaactctaagctttggtagtggaaaacct
tcttatattgaaagcattcaagacagtgaacctccacctgagcaaacagaagttgattcc
caaaatctgtcagaaacggaaagagtatatcacccacaggaaccgctgcgcgtgatggat
tctaaggtttcagagattgttggaatactgaggcagcactttttgtctataccggattac
agacacatggcagggctcaaaattaggatattgtgtactttacgatttgaatcagagcct
tttgctcgtacatggggtgtcaatgtgcctgctaatgggtttaatgaagaagactccctt
ccagcgatatatgcaactgttctcatattttcttcttcagcaccatatggaattgttcca
tcatatcacatacctttccttcttggtgaaccttctaggaatgcgtctcctgtgggtcaa
gctggttctcaagagatcatccctatcgaggataaatctcaagaagaaattaggttcaaa
gcttctgtaacaatagaattggaaccacgggaaccagtacctggtatgattgacgtttcc
attgaatcaaatacagaaaatggacagatcatccgtggtcagcttcaaagtattactgta
ggtattgaagacatgttccttaaagctattattccagaggaagtcaagggacatgcagta
tctgattattactttgccttgtttagtgcgctgtgggaagcatgtggcacttctgcaagc
actggacgggagacattctctctaaagggaggcaaaggggtcacagcaatcagtgggacc
cgatctgtcaagttgcttgaagttcctgcacagcttgtaattgaagctgtggagcggcat
ttggcgccttttgttgtgagtataattggaggaccccttgtaagtatcgtaaaagacggg
ggaatcataagtgatattttctggaaagatgttgattcagattcttctgctgatgttact
acctcaggcacaaatatggatagtggccccctatatctcaagtacactgaagacgaagat
gacagaggaggtcacatcaatgtcaataagaaaaacatgggttgctttcttattttgata
ttccttcctccaaggttccatctccttttccagatggaagtgacagatgttgctacactg
gttcgtataagaactgatcactggccgtgcctagcgtatatagatgattacctggaagca
ctgttctctgctcaaagatag
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