Daucus carota (carrot): 108196773
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Entry
108196773 CDS
T05350
Name
(RefSeq) vacuolar protein sorting-associated protein 52 A isoform X2
KO
K20298
vacuolar protein sorting-associated protein 52
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108196773
Membrane trafficking [BR:
dcr04131
]
Protein recycling
Others
EARP complex
108196773
Endosome - Golgi transport
Tethering complex
GARP complex
108196773
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps52_C
Vps52_CC
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
108196773
NCBI-ProteinID:
XP_017219698
UniProt:
A0AAF0XJ78
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Position
7:24922814..24935548
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AA seq
706 aa
AA seq
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MAELAMNTLGQSYNDTNDTHKFAFDLGEFVGDLSVDEDNASDDISLEGLQQELEECKNDD
VVANILSKGTKLRDYTKGVENNLRQVELDSIQDYIKESDNLVSLHDQIRDCDLILSQMET
LLGGFQDEIGSISSDIKILQEKSMDMGLKLKNRKVAESKLAKFVEDIIVPPRMIDIIVDG
EVNDEYMRTLEILSKKLKFVEADSLVKTSNALKDVQPELEKLRQKAVSKVFEFIVQKLYA
LRKPKTNIQILQQSVLLKYRYLMSFLKEHGKEIYNEVRAAYIDTMNKVLSAQFLAYIQAL
EKLQLDIATSSDLIGVEARGTSLFSRGREPLKNRSAVFALGDRLNILKEIDEPALIPHIA
EASSRKYPYEVLFRSLHKLLMDSASSEYLFCGDFFGEESIFGEIFAGPLLVIDEHFNTVL
SNCFDAIGLMLMICIIHRHQVIMSRRRIPCLDSYLDKVNISLWPRFKMVFDMHLNSLRNA
NVKSLWEDDVHPHYVMRRYAEFTASLIHLNVEYGDGQLELNMERLRMAVDDLLVKLAKTF
TKPKLQTVFLINNYDMTIAVLKEASEGGKIQMHFEELLKNNTAVFVEELLLEHFSNLIKF
VKNRASEDSSAGSEKPITVAEVEPLVKDFASRWKAAIELMHKDVITSFSNFLCGMDILRA
AMTQLLLYYTRLSDCIKKIAGGSALNKDLVSISSIMYEIRKYSRTF
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atggctgagttagccatgaacacactgggtcaatcttataatgatacaaatgatacccat
aaatttgcgtttgatctgggggaatttgttggtgatttatctgttgacgaggataatgcc
agtgatgatatttcacttgaaggtctacagcaggagctcgaagaatgcaaaaatgatgat
gtggtagcaaacatattgtccaaaggaacaaaattacgggattacacaaagggtgttgaa
aacaatttacgacaagttgaattggactctattcaggattacataaaagaaagtgacaat
ctagtctcacttcatgatcaaattcgtgattgtgacctcatcctttcgcaaatggaaaca
ttgcttggtgggtttcaggatgaaattggttccatcagttcagacattaaaattcttcaa
gagaagtccatggatatgggactcaagctgaagaaccgcaaggttgccgaatcaaaattg
gccaaatttgttgaagatataatagtcccaccaaggatgatagacatcattgttgatgga
gaggtcaatgatgaatatatgaggactcttgaaattctgagtaagaagctgaagtttgtt
gaagccgattcattggttaaaacatctaacgctcttaaagatgtgcagccagagctagaa
aaacttcgacaaaaagcagtttcaaaggtatttgagttcattgttcaaaagctctatgca
ttgcgaaaacccaaaacaaatatccaaatattacaacagagtgttctgttgaagtacagg
tatctcatgtcctttctgaaggaacacgggaaggagatatataatgaggttcgtgcggca
tacatcgacactatgaacaaggttctaagtgcacaatttcttgcttatattcaagcattg
gagaagttgcaattggatattgcaacatcaagtgatctgataggtgttgaggccagaggc
actagtttattttcaagaggaagagaacctttgaaaaaccggtctgctgtttttgctctt
ggggatcggctgaacattctcaaggaaattgatgaacctgcgttgattccccatatagct
gaagctagctccagaaagtatccttatgaagtccttttcaggagcttgcacaagttgcta
atggattccgcatcttctgagtaccttttctgtggtgatttcttcggtgaagaatcaata
tttggtgaaatatttgcaggtccacttttggttattgacgagcacttcaatacagtcctt
tcaaattgttttgatgcaataggtctgatgcttatgatatgtatcattcacagacaccag
gtcataatgtctcgccgtcggataccatgtctggattcatacttggataaggttaatatt
tctttgtggccacgcttcaagatggtttttgatatgcaccttaatagcttgcgaaatgcc
aatgtaaagtcactgtgggaagatgatgttcatccacattatgtcatgagacgctatgct
gaattcacagcttcactgattcaccttaatgtggaatatggagatggtcagcttgaactg
aacatggaaagacttcgaatggctgttgatgacttgcttgtcaagcttgcaaaaacattt
accaagccaaagttgcagacagtgtttctaataaacaactatgacatgacaattgctgtg
ttgaaggaagctagtgaaggtgggaaaatccagatgcactttgaagaacttctgaaaaac
aacacagctgtatttgtggaggaactactgctggagcattttagcaatcttataaagttt
gttaagaacagagcctctgaggactcgagtgctggttctgagaagccaattactgttgct
gaagtggagccacttgtaaaagactttgccagtagatggaaagcagcgattgagctgatg
cacaaggatgtcatcacttcttttagcaatttcctatgcggaatggatatcttaagagct
gccatgactcaactgctcctttattataccagactctccgactgcatcaagaaaattgct
ggcggatctgctctaaacaaggatcttgtttcaatatcttcgatcatgtatgaaattagg
aaatactctagaactttctag
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