Daucus carota (carrot): 108196779
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Entry
108196779 CDS
T05350
Name
(RefSeq) structural maintenance of chromosomes protein 4
KO
K06675
structural maintenance of chromosome 4
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108196779
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Chromosome condensation proteins
Condensin I
108196779
Condensin II
108196779
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_29
ERM_helical
AAA_15
Laminin_II
AAA_23
ABC_tran
Motif
Other DBs
NCBI-GeneID:
108196779
NCBI-ProteinID:
XP_017219703
UniProt:
A0AAF0XKY2
LinkDB
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Position
7:31656432..31667316
Genome browser
AA seq
1253 aa
AA seq
DB search
MGVPIDPTPTPTPSATPTMESESTQNGHSKTPRLFISKMEMENFKSYAGKQIVGPFHKSF
SAVVGPNGSGKSNVIDAMLFVFGKRAKQMRLNKVSELIHNSTNHQNLDCASVTVYFQEII
DLEGEMYEVVPGSEFSVTRKAYRTEKVEYFINNHSSTYTLVTKKLKEKGVDLDNNRFLIL
QGEVEQISLMKPKAQGPHDLGFLEYIEDIIGTNKYVEPIEELSKELETLTEKRTGVVEMV
KLAEKERNSLEDVKNEAEAYMLKEWSLLKWKDKATNLASEENSAQMGELQAKLSQFEENL
KSEREMIKENKNKLKKLEVMHSEKMKFQEELDSDLKHCRDEFKEFERLDVKHREDFKHVK
QKIKKLDDKLEKDSVKITEIEKESEESTNLIPQLEGDIPKLQKLLSDEESLLEEIKENAK
VETEIYRSELTKVRAELEPWEKQLIEHKGKLDVASNESKLLNDKHEAGRAAYEDAKRQLC
DIHENIETKTASLKEIQSELEKSKLQVLEQRKVEQDCLKEQDQLIPLEQSARQKVTELVS
VMESEKSQGSVLKAIMQAKESNEISGIYGRMGDLGAIDGKYDVAISTACPGLDYVVVETT
AAAQACVELLRRKNLGVATFMILEKQVNHLSRINEKVKTPEGVPRLFDLITVKDERIKLA
FFAAMGNTVVAKDIDQATRIAYGGDREFRRVVTLEGALFEKSGTMSGGGGKPRGGKMGTS
IRVSSVSREAVTDAEKELSLVLGKLDMIRQKINDAARSYQSSEKAISHLEMDLAKCQKEV
DSLKSQHAYLEKQLDSLKDASKPSNDELEALKKLTRIISGEENEIARITESSKNLKEKAS
ELQNKIENAGGEKLKGQILKVKNIQSDIDTKSTEINRHKVQIETGKKMIKKLTKGIEDSK
TERERISLEKEKLLANFKEIEQKAFAVQENYKKTQERIDQHKDGLEKAKSEYEELKKTVD
ELRASEVDADYKLKDMKKLYKDLEIKGKGYSKQIDDLENATRNQLEQIKKDLVDPEKLQE
TLADASLHEACDLKRGMEMVVLLESQLKEMNPNLESISEYRKKVSLYNERVEELDSITQQ
RDEVKERHDELRKKRLDEFMAGYNAISLKLKEMYQMITLGGDAELELVDSLDPFSEGIVF
SVRPPKKSWKCIGNLSGGEKTLSSLALVFALHHYKPTPLYVMDEIDAALDFKNVSIVGHY
VKDRTKNAQFVIISLRNNMFELADRLVGIYKTDNCTKSITINPTSFGICQKSA
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atgggggttccaattgatccgactccgactccgactccgagtgcgactccgaccatggag
tcagagtcgactcagaacggccattcgaaaactcccagactattcatcagcaaaatggaa
atggagaacttcaaatcttatgctgggaaacaaatcgtcggtccttttcacaagagcttt
tcggctgtggttggtccaaacggcagtggtaaaagcaatgttattgatgctatgcttttc
gtatttggcaagagagccaagcagatgcggcttaataaagtatcggagctcattcataat
tctactaatcaccagaatctggactgcgctagtgtcacagtttactttcaagaaattatt
gatttggagggcgagatgtatgaagtagttcctggaagtgaatttagtgtcactcggaag
gcgtatcgtaccgaaaaagttgaatattttataaataatcactcaagtacttatactcta
gttacaaaaaagttgaaagagaaaggagtagacttggacaacaaccggtttttaatccta
cagggagaagttgagcagatatcactaatgaagccaaaggcgcaaggtccacatgatttg
ggttttcttgaatatattgaagatataatcggaaccaataaatatgtggaaccaattgaa
gaattgtcgaaagagctagaaactcttacggagaaaaggactggagttgtggagatggta
aaattagcagagaaagaaagaaatagcttggaggatgtaaagaatgaagcagaggcttac
atgcttaaggagtggtcgcttttaaaatggaaagataaagccacaaatctggcttccgag
gaaaattctgctcaaatgggggaactacaagcaaaactttctcaatttgaagaaaatctt
aaaagtgaaagggaaatgattaaagaaaataagaataaactgaagaagcttgaggtgatg
cactcagagaaaatgaagttccaagaggaacttgacagtgatcttaagcactgtagggat
gagtttaaggagtttgaaaggctggacgtaaaacatcgtgaagatttcaagcatgtgaaa
caaaagattaaaaaacttgatgataaactcgagaaggattccgtaaagatcactgaaatt
gagaaagagtccgaggagtcaactaatttgattccacaactcgaaggagatatacctaaa
ctgcaaaagcttctatcagatgaagagagtctcctggaagaaatcaaggaaaacgcaaaa
gtggaaactgagatataccgcagtgagctcacaaaggtccgtgctgagctggagccttgg
gaaaagcaattgattgaacacaagggaaagctcgatgttgcatccaatgagagcaaacta
ttaaatgataagcatgaggctggtcgtgctgcttatgaggatgccaaaagacagttgtgt
gacatacacgaaaatattgaaacaaagactgcaagcttaaaagaaattcaaagtgagttg
gagaaaagcaagcttcaggttctggaacaacgtaaagtggagcaggattgccttaaagag
caagatcaactgattcctcttgaacagtctgcaagacaaaaagtcacagagctcgtatct
gttatggaatctgaaaagagtcagggatcagtgttaaaagcaataatgcaggctaaagag
tcgaatgaaatttcgggtatctatggacgaatgggtgatctcggtgctatagatggaaaa
tatgatgttgccatctcaacagcatgccctggacttgattatgttgttgtagaaacaact
gctgcagcacaggcatgtgtggaattacttcgaaggaagaatcttggtgtagcaaccttc
atgatcttggaaaaacaagttaatcatctatctagaataaatgaaaaagtaaagactcct
gagggtgtaccgcgcctttttgatttgatcacggtcaaggatgagagaattaaacttgct
ttctttgcagccatgggaaatacagttgtagcgaaagatattgaccaggcaacacgtatt
gcgtatggtggggacagggaatttcgccgggttgtgacattggaaggtgccctttttgaa
aaatctggtacaatgagcggtggaggaggcaaaccgcgtggtggtaagatggggacatct
atccgggtctccagtgtttcccgagaggctgttaccgatgctgaaaaggagctctcattg
gttcttggcaaattagatatgatacgacaaaaaattaatgatgcagcacgtagttaccag
tcttcggaaaaagcaatatcacatcttgaaatggacctagcaaagtgtcaaaaggaggtt
gacagtctgaaatcacaacatgcttatcttgaaaaacaacttgactctctaaaggatgca
tcaaagccaagtaatgatgagcttgaagccctgaaaaaacttacccggattatctctgga
gaagaaaatgaaattgctaggatcacagaaagttctaagaatctgaaagaaaaggcttcg
gagttacaaaataaaatagagaatgcaggtggtgaaaaattaaaaggccagatattgaaa
gttaaaaatattcagtctgatattgacacaaagagcacagaaattaaccgtcacaaagtt
caaatagaaacagggaaaaagatgattaagaaattaacgaagggcattgaggattcaaaa
acagagagagagcggatttctttagaaaaggagaagctgcttgccaacttcaaggagata
gaacagaaagcgtttgccgtccaggaaaactataagaagacacaagagcgcattgatcaa
cataaagatgggcttgagaaagcaaagtctgagtatgaagagttaaaaaagaccgttgat
gagttgcgggcatctgaggttgatgctgactacaagctgaaggatatgaagaagctgtac
aaggatctggaaataaagggaaaaggatacagtaaacagattgatgacttggaaaatgct
actagaaaccaattggaacagattaagaaagatcttgtagatcctgaaaagcttcaagaa
actctggcagatgcaagtcttcatgaagcctgtgaccttaaaagaggcatggaaatggtt
gtgcttctagaatcacaacttaaagagatgaatccaaatcttgagtccatctcggagtat
cgaaagaaagtgtccttgtacaatgaacgcgtggaagagcttgattctattactcagcaa
cgtgatgaggttaaggagcgacatgatgaattgaggaagaagaggttggatgagtttatg
gctggatataatgcaatatcactgaagttaaaagaaatgtatcagatgatcacgctagga
ggtgatgcagaacttgagcttgtggactctttagatcccttctctgaagggattgttttt
agtgtcagaccccctaaaaagagctggaaatgcataggaaacttatctggtggagaaaag
actctaagctccctcgctcttgtttttgcccttcaccattacaaacctacaccgctctat
gttatggatgaaattgatgctgctttagattttaaaaacgtttctattgtggggcattat
gttaaagacagaacaaaaaatgcccaatttgtaatcataagcctcaggaacaacatgttt
gagctggcagaccgtcttgtggggatatacaaaactgataattgcaccaagagcatcact
atcaatccaacaagttttgggatttgtcaaaaatccgcataa
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