Daucus carota (carrot): 108196802
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Entry
108196802 CDS
T05350
Name
(RefSeq) RGG repeats nuclear RNA binding protein A
KO
K13199
plasminogen activator inhibitor 1 RNA-binding protein
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108196802
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
108196802
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
HABP4_PAI-RBP1
Stm1_N
Motif
Other DBs
NCBI-GeneID:
108196802
NCBI-ProteinID:
XP_017219727
UniProt:
A0A161ZL75
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Position
7:27388412..27393944
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AA seq
359 aa
AA seq
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MATANPFDLLGDDDNDDVSHLIAIQQKKKATAASPAPAVAKQPAKPAKLPSKPAPPAQAV
KEAKSEGIRGGGRGGGRGYGRRGGGGYNRDFASNDSSFRNSGLAGSQGAIDGSDSGKTFE
RRGSYGGPRSGFRGDRRGGDEGEENQNRRVFERHSGTGRGNEYKREGSGRGNWGTPTDEI
SQVTEEISVEGERSLDAKKPSGEEDAGDGNKDKAENDSEEKDLENKEMTLEEYEKVLEEK
RKALESLKTEARKVEMDKELASMQPLSSKKSNDEIFAKLGSDKDKRKDSAEKEERAKKSL
SINEFLKPAEGETYYSGGARGRGRGRGFRGSSSGSSGTSNYGKAPAIEDPSQFPTLGGK
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atggccactgccaacccgtttgatttgctcggcgacgatgataacgacgacgtttcgcac
ttgattgctattcagcagaagaagaaagcaacagctgcttctccggcgccagcggttgct
aagcagcctgccaaaccggcgaagcttccgtccaagcctgcgccacctgctcaggccgtg
aaagaagcaaagagtgaaggtatccgtggaggagggcgtggtggtggccgtggatatggg
cgccgtgggggaggtggatataacagagactttgccagcaatgatagctccttcagaaac
agtgggcttgctggtagtcagggtgctattgatggaagtgattcagggaaaacttttgaa
aggcgcggcagctatggtggacctcgcagtggattccgtggtgatcgccgtggtggagat
gagggagaggagaatcaaaatcgtcgagtatttgaacgtcacagcggaacagggcgcgga
aatgagtacaagcgcgaaggttctggtcgagggaactggggaacaccgactgatgaaatt
tctcaggtgaccgaggaaatctctgttgaaggtgagagaagtctggatgccaagaagccc
tctggagaggaagatgcaggagatgggaacaaggacaaagcggaaaatgattctgaagaa
aaagacctggagaataaggagatgacactggaagagtacgaaaaggttttggaagagaaa
aggaaagcactagagtcactcaaaactgaggcaaggaaggtggaaatggacaaagagctt
gcatctatgcaaccgctgtcaagcaagaagagcaatgatgaaatattcgctaaattgggt
tctgacaaagataagcggaaagatagtgctgaaaaagaggaaagagcaaagaagtccttg
agcattaacgagttcttaaagcctgctgagggggagacatactatagtggtggagctcgg
ggtcggggtcgtggacgtggttttagaggaagttccagtggcagcagcggaacaagcaac
tatggaaaagccccggctattgaagatcctagccagttccccacattgggtggtaaatga
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