Daucus carota (carrot): 108196859
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Entry
108196859 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108196859
KO
K21763
mitogen-activated protein kinase binding protein 1
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
dcr03036
]
108196859
Chromosome and associated proteins [BR:
dcr03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
108196859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_EML_2
WD40_Prp19
WD40
WD40_WDHD1_1st
Beta-prop_EML
WD40_CDC20-Fz
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR19_1st
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
108196859
NCBI-ProteinID:
XP_017219820
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All DBs
Position
7:complement(8004559..8016845)
Genome browser
AA seq
1274 aa
AA seq
DB search
MKPKKVDKSSKLILEEVIGLTTKGANGLASSSSSSKCVYIAGCVAVVYDVDSGTHSNLVV
SHRMPKPLSCIAVSPNGKFVAAGESGCQSAVLVWDLESSASLFELKGHQLGVACIDFSPD
GKHLVSVGFSHDGHLRLWEWRSGILAAKVKASSSFTAVASVKFTADGKFILTAGKSHLKF
WKLSKSSRANARTGLLAICGNSINLGHHRGCSFVALSSSFLTKSRLVDCNQNPEISPIHA
LTDTGILCLLDSQFKITKSVDLKVKKGFALSASNNVVACACNNGVVKMFAILSLKYSGSL
LYTEVKRCNKLIVKECDIKANESGYPDAIACQFSPSNKLVVVYEDHCLYVWDIHDESKGT
KSCVLVSHSACVWDVKSLSCEHMHDPSLACAARGCPGGTSFTTCSADGTIRLWDLILQSE
SSEGYSSTVNDCSLAITEPDGASCLVSAGIFEREYVMSNTRTKGFRAMAVSSDGKHLAAG
DCEGNLHLYNLHTSDYIYIPDAHNAEILSLTFSSPTKNDSSEKDIEVCYFLASGGRDHII
HLYDVDRNFNLIGSVEDHSAAVTSLKVNASGRKLLSCSAAGCMMLHDVAAAENGYNISRC
PNQVASHENVYDMAVDAMLECIVTVGKDKKVNTFNIAAEKLIGSFKQDGDFGEARNTTLD
PSSSYLVSSYANKSICMYDFLTGELVARAVGHGDTITGITFLPDCKHLVSVDANGCIFLW
KLPDPFSSRIVKSVEKLNIHLSPFIKDPPVAFSQIQFLEGDDSLCKANPLNEAALQYSGF
NLLRERMSCQGGNPEESTSFKFSVSRLPKWAQEKVTEGGVFPTRAKCSSLQQVGLQDVPN
SVRTGKSSVARHELHTPCKDNVEYSTKTSTTTKGSEDTESGSSTTPKEASRSFALDRRWI
TIHTVCLDLLNSPEVWDMKQMQVQQPFRNLSGDNIGEDPTDNQHIKLLSGVGDCKIDNSY
EDTIGNHANCEGTMSNDTSSLNNSGSIYNSISPHDTRNAVACCRENTCSGSEDSEHKQPA
STESRGETTEYTHPSTVDDDQENKTPYPSSENLFENIKDGKSSLRRRYSSQFVVRHDLLR
GQQKQLGTPIRSRGTMSSSKDTRPCILLEDHHSVQIFEESPKLTKQGINAAQVSLSPNCL
IPPNDSVGLSSRHEEFNFGVNDKTDTISSCEEALIRLDSATENALEQFSKLDSLASKINV
LTGPEAHLYDEATKMLPSIAKRVHTIARLAQSKQNNNCEESGIDIPSFEPLLGIFAENIS
QRVVEILKKNAVTL
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atgaagcccaaaaaagtggacaaatcttccaagctgattttggaagaggtgattggattg
acgactaaaggtgctaatggattggcatccagtagttccagttccaaatgtgtgtatata
gctggatgtgttgcggttgtttacgatgtcgattctggaacacactcgaatcttgtcgtt
tctcatcgaatgcccaagcctttgagctgcattgctgtttcaccaaatggaaagtttgtt
gcagctggagagtcagggtgtcaatctgcagttcttgtatgggacttggagagctcggct
tctctattcgaactcaaaggccatcaacttggtgtggcatgcatagatttctctcctgat
ggtaaacatctggtttctgttggattttctcatgatggccacctccgcctatgggaatgg
aggagtgggatattagctgcaaaggttaaagcaagttcatcctttactgctgttgcatct
gtcaaattcacagcagacggaaagttcattttaactgccggcaaaagtcatttgaagttt
tggaaactatctaaaagttctcgtgctaatgccagaacaggattactggcaatatgcgga
aattctataaatttaggtcatcacaggggatgctcatttgtagctctttcatcttcattt
ttgactaaaagtagattggtcgattgcaatcaaaatccagaaatctctcctatccatgca
ttaacagatacaggtattttgtgtcttctggattctcaatttaaaatcacaaaatcagtt
gacttgaaggtcaagaaaggatttgctttatctgcctccaacaacgttgttgcttgtgca
tgcaacaatggggtggttaaaatgtttgcaatattatctcttaaatattctggaagcttg
ttatacactgaagttaaaagatgcaacaagcttatcgtcaaggagtgtgatataaaagcc
aacgaaagtggatatcctgatgctatagcttgccaattctcaccctccaacaaacttgta
gtggtttacgaagatcactgcctctacgtatgggatatacatgatgaatccaaaggtacc
aagtcttgtgtactagtttcgcatagtgcatgcgtatgggatgttaaaagtttatcatgt
gaacacatgcacgatccttctcttgcatgtgctgctagaggttgtcccggcggaacctct
ttcacaacttgctcggcagatggaacaattaggttgtgggatctcattctgcagtccgag
tcgtcagaaggttactcatctacagttaatgactgttctctagcaattacagaaccagat
ggcgcttcttgcttagtgagtgccggaatttttgaaagagaatacgtgatgtcaaatacc
aggaccaaagggtttcgcgcaatggcagtcagttctgatggaaagcacctcgctgctggt
gactgtgagggaaatctccacttgtataacctgcatacttctgactacatatatataccg
gatgctcacaatgctgaaatcctgtcattgacctttagctcacctacaaaaaatgattct
tctgagaaagatatagaagtgtgctactttcttgcgtcaggtggacgagaccatataatt
catctttatgacgtggacaggaattttaatcttattggaagtgttgaggatcattcagct
gctgtgacttctctaaaagtcaatgccagtggacgtaaactcctaagctgtagtgctgct
gggtgtatgatgcttcatgatgtagctgcagcagaaaatggttataatatttctcgttgc
cctaatcaggtggcgtctcatgaaaatgtatatgacatggctgtagatgcgatgctggag
tgtattgtcactgttgggaaggataagaaggtaaacacatttaacattgctgccgagaaa
cttattggttcattcaaacaagatggagattttggagaggcgagaaatacaactttggat
ccaagcagtagctatttggtatcttcttacgcaaacaagtctatatgcatgtatgacttt
ttgactggggaattggttgcacgagcagtggggcatggtgacactataactggcatcacc
ttcttaccagattgcaagcacttggtgtctgtggatgccaatgggtgtatttttctatgg
aagctacctgaccctttctcttctagaatagtgaagagtgttgagaaattaaatattcat
ctgtccccattcataaaagatcctccagtagctttttcacagatacaatttcttgaaggg
gatgatagcctatgcaaagctaatcctttaaatgaagctgcattgcagtattcggggttt
aacctccttcgtgaaagaatgtcttgccagggaggtaatcctgaagaaagcacatcattt
aagtttagtgtctccaggcttccaaagtgggcacaagagaaagttactgaaggtggcgtg
ttccctacaagagccaagtgctcttcattacagcaagttggcctgcaagatgtccctaac
tccgttagaactgggaaaagttctgttgcacgacatgagttacatacgccatgtaaagac
aatgtggaatacagtacaaaaactagtactacaaccaagggttcagaagataccgagagc
ggatcatctacgacacctaaagaggcttctaggagctttgcgttagataggcggtggatc
accattcatactgtatgtttggatctgctaaattcaccagaggtttgggatatgaaacaa
atgcaagtgcagcagccctttcggaatttgtcaggagacaatatcggggaggatcctact
gataatcagcacattaagctcttatctggggttggggactgtaaaatcgataattcttat
gaagatacaattggtaaccatgcgaattgtgagggtaccatgtctaatgatacttccagc
ttgaacaactccggtagtatatacaatagtatcagtccacatgataccagaaatgcagtt
gcatgctgtcgtgagaatacttgcagcgggtcagaagactcagaacataagcaaccagcc
tcaacagaaagccggggagaaacaacggaatatactcatccctccactgttgatgatgat
caagagaataaaaccccgtacccgagttcggaaaatttgttcgaaaatatcaaggatgga
aaatcatcgttaaggagaaggtactcatcgcagtttgttgtccgtcacgatcttcttaga
ggccaacaaaaacagcttgggacacccatacgaagtcgtggtacaatgagcagtagtaaa
gataccagaccttgtatcttgttagaggaccaccattctgtgcagatatttgaagagtca
ccaaaacttactaagcagggcataaatgcagcacaagtatctttgagcccgaattgcctt
atcccgccaaatgattcagttggactttctagcagacacgaggaattcaatttcggggta
aatgacaaaactgatacaatcagttcatgtgaagaagcattaatcagattggattctgca
actgagaatgcactagaacaattttctaagctagatagcttggcttcaaaaataaatgtt
ttaacaggtccagaagctcatttatatgatgaagccactaagatgcttccatcaatagca
aagagagttcataccattgccaggttggcgcagtctaaacagaacaataattgtgaggaa
tcagggatagatattccaagttttgaacctttattaggaatatttgcggaaaatatatca
caaagggtggtagaaatattgaagaaaaacgcagtcactctgtaa
DBGET
integrated database retrieval system