Daucus carota (carrot): 108196877
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Entry
108196877 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase SIRP1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108196877
04121 Ubiquitin system [BR:
dcr04121
]
108196877
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108196877
Membrane trafficking [BR:
dcr04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
108196877
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108196877
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
Zn_ribbon_19
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-rbx1
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
Zf_IFT144_1st
Motif
Other DBs
NCBI-GeneID:
108196877
NCBI-ProteinID:
XP_017219842
UniProt:
A0A161Y3F1
LinkDB
All DBs
Position
7
Genome browser
AA seq
388 aa
AA seq
DB search
MDENRGDSTGGFWCHMCSQMVDPIMEVESVKCPLCQGGFVEEIETAPVANAFRGNNHSSE
FGGLEGMDADRSLSLWAPILLGMMSNPRRRRRVRRLPEDDDDDEVRGGDEEQEHHHRHHH
HHPEGESELDRELESIIRRRRRSSATILQLLQGIRAGIQSESENNGESDNESNRDRSNNR
ERERVILINPFNQTIIVQGAHGSGNSTGSQNPVGSLGDYFIGPGLDLLLQHLAENDPNRY
GTPPARKEAVEALPTVKVDGNLQCSVCLEDFEVGAEAKEMPCKHRFHSECIFPWLELHSS
CPVCRHQLPCDESKVDNISSHGMGETNNGNSSGEGDAEGTNGTPRRFNVPWPFSNLFSSS
GSPIVNANSSSTGSSTNASGNSNRTEEN
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatgagaatagaggtgattcaactggtggcttctggtgtcatatgtgcagccaaatg
gttgacccgatcatggaggttgagagtgtcaaatgccccctttgtcagggtggtttcgta
gaggaaattgagactgcccctgttgccaatgctttccgtggcaacaaccattcatctgaa
tttggagggctggaaggcatggatgctgatcgctcactttccctttgggctcctatttta
cttggtatgatgagtaatcctcgtcgtaggcgtagagttaggcgtttgcctgaggatgat
gatgatgatgaagtaagaggtggagatgaagaacaggaacaccatcatcgtcatcaccat
catcatcctgaaggggagagtgaactagatcgagaactggaatccatcattcgtaggagg
aggagaagctccgcaactattcttcaactccttcaaggcattcgagctggaatacaatcc
gagtcagaaaataatggtgaatcggataatgagagcaacagggatcgcagtaataataga
gaaagggagcgtgtgatcctaatcaaccctttcaatcagaccatcatcgtccaaggtgca
catggctcaggcaacagcactggaagtcagaatccagttggatctttgggcgattacttc
ataggccccgggttagacttgcttctgcagcatttagccgaaaatgaccctaacaggtat
ggcactccaccagcacggaaggaagcggtggaggcattgcctactgtcaaagtggatgga
aatctgcagtgctcggtttgtttggaggactttgaagttggggctgaagcaaaggaaatg
ccttgtaaacacaggttccatagcgagtgtatttttccatggcttgagctgcacagttcg
tgtcctgtttgcaggcatcagttaccttgtgacgagtcaaaggttgacaatatcagcagc
catggcatgggtgaaactaataatggaaacagtagtggtgaaggtgatgcggaagggaca
aatggaaccccgagacgattcaacgtcccttggccatttagtaatttgttctcatcctca
gggtccccaattgtgaatgcaaactcatcttcaacagggtcgtcaacaaatgcatctgga
aattctaatcgaacagaggaaaactga
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