Daucus carota (carrot): 108196927
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Entry
108196927 CDS
T05350
Name
(RefSeq) CRS2-associated factor 2, chloroplastic isoform X1
KO
K27710
CRS2-associated factor 2, chloroplastic
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108196927
Spliceosome [BR:
dcr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
108196927
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Gene cluster
GFIT
Motif
Pfam:
CRS1_YhbY
Motif
Other DBs
NCBI-GeneID:
108196927
NCBI-ProteinID:
XP_017219909
UniProt:
A0A161ZJV8
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Position
7:complement(9500584..9503963)
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AA seq
548 aa
AA seq
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MAVVAKLHLFSNLPSNPPPQPQPTPQSHRPPKPPIPIPKYPPPKPKKPPTPPNPAFKTHH
NRSKYYKPVKQGVLASDDGRTILIGDSGVSYQLPGAPFEFQFSYSETPKVKPLAIREPAF
LPFAPPTMNRPWTGKAPMKKAKRNVRLFGSGEEESDGVRRMEMRGGYEVKELFGGELRPR
NEVLGRPLSKAEARELIKPYLSSNRQVNLGRDGLTHNMLELIHTHWRREPICKVRSLGVP
TVDMNNVCRCLEEKTGGKIIFRVGGIAYLFRGRNYDPRNRPRYPVMLWKPATPVYPKLIQ
EAPEGLTKAEADVFREKGKKLLPICKLAKNGVYATLVRDVRSAFEECAIVKINCTGMHAS
DYKKIGAKLKELVPCVLLSFDDEQILMWRGHDWKSMYKRSPKAPSPVHDTTANGMNRSDQ
ESGSRKVQLSPKMMSLWSRAIESNQAMVLDDLGLGPDALLEKVEEFERTSQATVHSFPAL
ILPSEDVSGNRNEGPEEESSLDDGGYQSYDSEYDDDSDINDSFDGMDSSAPLGSLPIDLI
AKQFSDSE
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagtagtagcaaagcttcatctcttctccaacctcccctccaaccccccaccacaa
ccacaacccaccccccaatcccaccgtcctcccaaaccccccatccccatcccaaaatac
cccccacccaaacccaaaaaacctccaaccccaccaaacccagctttcaaaacccaccac
aaccgctccaaatactacaagcccgtcaaacaaggcgtgcttgcatctgacgatggacgg
accatcttgattggcgactccggggtgtcttaccagctccccggagctccgtttgagttc
cagttcagttactccgagactcccaaggttaagcccttggcgattcgtgaaccggcgttt
ttgccctttgcgccgcctactatgaataggccgtggaccgggaaggccccgatgaagaag
gcgaagaggaatgtgaggcttttcgggtcaggcgaagaagaaagtgatggagttaggagg
atggaaatgcgtggagggtatgaggtgaaggagttgtttgggggtgagctcaggcccaga
aatgaggttcttgggcggccgttgagcaaggccgaggcgagggagcttattaagccgtat
ttgtctagtaatcgccaagttaatcttggaagagatggattgacgcataatatgctagaa
cttatacatacacattggagacgagagcctatttgtaaagttcgtagccttggtgttcca
acagttgatatgaacaatgtttgccggtgtcttgaggaaaagactggtggtaaaatcatt
ttccgcgttggtggcatagcatatctgtttcgtggaagaaactatgatcctcgtaaccga
cctcggtacccggtgatgctttggaaaccagctacaccagtttatccaaagcttatacaa
gaagctcctgaaggtttaacaaaagctgaagccgatgtattccgggaaaaagggaaaaag
cttcttccaatctgtaaattagctaagaatggagtttatgcaaccctagtgagagatgtg
aggagtgcttttgaagaatgtgctatagtaaagattaactgcacggggatgcatgcaagt
gattacaaaaagattggtgctaaactaaaggagttggttccatgtgtgttgttatctttt
gatgacgaacaaatactgatgtggagggggcatgattggaaatctatgtacaaacgttct
cccaaagctccaagtcctgtccatgatacaactgccaatggtatgaacagatcagatcaa
gaatctggcagtagaaaagtgcagttaagtccaaagatgatgtctctgtggagtcgtgca
attgagtcaaaccaggcaatggtactggacgaccttggtctaggtcctgatgctcttcta
gagaaggtggaggaatttgagcgcacatcacaggctacagtgcactcttttccagcatta
atcttgccaagcgaagatgtttctggcaaccgaaatgaagggcctgaagaagaaagcagt
ttagatgatggtggttatcagagctacgacagtgaatatgatgatgacagtgacattaat
gactcatttgatgggatggattcatcagctcctctgggatcattacctattgatctgatt
gcaaagcaatttagtgactctgaataa
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