Daucus carota (carrot): 108196995
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Entry
108196995 CDS
T05350
Name
(RefSeq) ubiquitin-like modifier-activating enzyme atg7 isoform X1
KO
K08337
ubiquitin-like modifier-activating enzyme ATG7
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
108196995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108196995
04121 Ubiquitin system [BR:
dcr04121
]
108196995
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108196995
Membrane trafficking [BR:
dcr04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
108196995
Atg8 conjugation proteins
108196995
Ubiquitin system [BR:
dcr04121
]
Ubiquitin-activating enzymes (E1)
UBL-activating enzymes
108196995
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
108196995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG7_N
ThiF
Shikimate_DH
2-Hacid_dh_C
Motif
Other DBs
NCBI-GeneID:
108196995
NCBI-ProteinID:
XP_017219944
LinkDB
All DBs
Position
8:complement(17755116..17761496)
Genome browser
AA seq
707 aa
AA seq
DB search
MAGHDNGSVLQFAPFQSSVDEGFWHRLSSLKLNQLGIDESPIFITGFYAPCSHSQVSNHL
TLLGESLPPEPSAQSSHLSLRSGNRNRCSVPGILYNTNTLESFQALDKQSLMKAEAKKIW
EDIHSGRAEQESSVLSRFLLISFADLKSWKFYYSFAFPALVLDPPAMITSLKPASQCFSL
EEADSLTAVCNEWRNSSTTADVPFFLVSIDSNSHATIRHLKDWEVCRSDGYKQLLFGFYD
PCHLPNNPGWPLRNFIAFICSRWNLQKIRFFCYREHRGFADLGLSLVGEALISVSQEWKL
HKHIPKAVGWEVNKGKKTRCITLANSMDPIKLAVSAAELNLKLMRWRALPSLDLHMLSAT
KCLLLGAGTLGCQVARMLMAWGVRKITLVDSGKVSMSNPLRQSLYTLEDCLNGGEYKALA
AVKSLKQIFPAVEADGIVMAIPMPGHPVPSQDEHDVLEDCRRLQDLIDSHDAVFLLTDTR
ESRWLPTLLSSNANKITITAALGFDSFLVMRHGAGPLVDYRSESMSALSAELGNFSLADR
DKRPRLGCYFCSDVVAPIDSTSNRTLDQQCTVTRPGLAPIASALAVELLVGILHHPHRIF
AKAEFANSMDNGSTEQPLGILPHQIRGSLSQFSQMTLVGHSSSSCTACCSIVVNEFHNRK
MDFVLEAINHPTYLEDLTGLTELKEAANSFDLDWDNDIDDDDECVEI
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggctggacatgataatggatcagttcttcagtttgcaccttttcaaagttctgtggat
gaaggcttttggcacaggttatcatctttgaaactcaatcaattgggaattgatgaatcc
ccgatttttataacaggtttttatgcaccttgttcacattcgcaagtttcaaatcattta
actcttcttggtgaatctttgccgcctgaaccaagtgctcaatcatcacatctatcttta
aggtccgggaacaggaatagatgctctgttccaggaattctttacaacacaaatacgttg
gaaagctttcaagcacttgataagcaaagcttgatgaaggctgaagctaagaagatttgg
gaagatatacattccggaagagcagagcaggaaagttctgttctttcgaggttccttctt
atatcattcgcagaccttaaaagttggaagttttactactcttttgctttccctgctctg
gtgcttgatcctcctgcaatgataactagtttgaagcctgcttcccaatgctttagccta
gaggaggctgattcgctgacagcagtttgtaatgagtggcggaattcaagcacaactgca
gatgtgccattctttttggtgtcgattgattcaaattcacatgccaccatcagacatctg
aaagactgggaagtttgcagaagtgatggttataagcagctcctttttggcttttacgat
ccttgtcatcttccaaataatcctggctggcctctacgcaacttcattgcatttatatgc
tcaagatggaatcttcaaaaaattcggtttttctgctatcgtgaacatcgtggttttgct
gatctggggttgtccctcgttggtgaggccttaatatcagtttcacaagaatggaaactt
cataaacatattcctaaggctgttggatgggaggtgaacaaaggaaagaagactcggtgc
attactcttgctaattccatggatccaatcaagttagcagtatcagctgcagagttgaac
ttgaagctaatgagatggcgtgctttgccatcattggacctgcatatgctgtctgctacc
aagtgtcttctcctcggtgcaggtacccttggatgtcaggtggcccgcatgcttatggct
tggggtgtccgtaaaattacactagttgacagtggcaaggtatcaatgtcgaatccactg
cggcagtccttatacacattggaggactgccttaatggtggtgaatataaggccctggct
gcagttaaaagtcttaaacagatatttcccgctgtggaagctgatggcattgtgatggcc
ataccaatgcctggacatccagttcccagccaagatgagcatgatgtacttgaggattgc
aggcgattacaggatttgattgattctcatgatgcagttttccttttgactgatacaagg
gaaagccgttggctaccaacccttctatcttccaatgccaacaagattactattacagct
gctttaggttttgatagttttctagttatgcgtcatggtgctggtccccttgtcgattac
agatctgaatccatgagtgctttatctgctgaattgggaaatttttctctcgcagacaga
gataaaaggccgagattaggttgttacttttgcagtgatgtcgtcgcgccaattgattca
acttctaaccgaactttagatcagcaatgcacagttacacgtccgggtcttgctcctata
gcatctgcccttgcagttgaacttctagttggaatattacatcatccgcatagaatattt
gccaaagctgaatttgccaattctatggataatggatcaacagagcaacctcttggaatt
ttaccccatcagattcgaggttcactctctcaattttctcagatgacacttgtcggccat
tcgtcaagtagctgtactgcttgctgtagcatcgtggtaaatgaatttcacaacaggaag
atggattttgtccttgaagccataaatcaccccacttatttggaggacctcacaggtctg
acagagctaaaggaagctgcaaattcttttgatttggactgggataatgatatagatgat
gacgatgaatgtgttgaaatctaa
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