Daucus carota (carrot): 108197151
Help
Entry
108197151 CDS
T05350
Name
(RefSeq) novel plant SNARE 12
KO
K08494
novel plant SNARE
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108197151
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25[N] (Qb)
NPSN
108197151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec20
V-SNARE_C
MCPsignal
VBS_C3G9
TMPIT
PigL_N
GCIP_C
HR1
Occludin_ELL
Motif
Other DBs
NCBI-GeneID:
108197151
NCBI-ProteinID:
XP_017220156
UniProt:
A0A175YPU5
LinkDB
All DBs
Position
8:complement(28823277..28828787)
Genome browser
AA seq
271 aa
AA seq
DB search
MSTSDLPMSPQLEQIHGEIRDNFRALANGFQKLDKVKDSSRQSKQLEELTGKMRECKRLI
KEFDREIKDEESRNPPEVNKQLNDEKQSMIKELNSYVSLRKTYMSSLGNKKVELFDTGVG
ASEPTAEDNVQMASTMSNQELISAGNRTMDETDQAIERSKQVVHQTVEVGTQTASTLKGQ
TDQMGRIVNELDTIQFSIKKASQLVKEIGRQVATDKCIMLFLFLIVCGVVAVIVVKIVNP
NNKDIRDIPGLAPPAPTARRLLYLKSGNYLV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacttcagatttgccgatgagtcctcaattggagcagatccacggtgaaattcgc
gataattttcgtgccctcgctaatggcttccagaaattggacaaggttaaagactccagt
aggcaaagcaagcagctggaagaacttacggggaagatgagagaatgtaaaaggttgatt
aaagagtttgaccgtgaaataaaggatgaggagagtcgaaaccctcctgaggtcaataaa
cagcttaatgatgagaagcaatcgatgatcaaggagctgaattcatatgtttccttgagg
aaaacgtatatgagcagtcttgggaataagaaagttgaactttttgatactggagtaggt
gctagtgaacctacagccgaagacaatgttcaaatggcatcgacaatgtcgaaccaggag
cttatcagtgctgggaataggacgatggatgagactgatcaggccatagaacgctcgaaa
caggtggttcatcaaacagttgaagtgggaacacagactgcttcaaccttgaagggacaa
accgaccaaatggggcgtatagttaatgaactggatacaatccagttctctatcaagaag
gcatcacagcttgtaaaggagattggtaggcaggtggccactgacaaatgcataatgctt
tttctgtttctaattgtatgtggggtggttgctgtaatcgttgtgaagattgtaaatccc
aacaacaaagacatcagagacattcctggattggctcctccagcccctacagcgaggaga
cttttgtatttgaagagtggaaattatttagtataa
DBGET
integrated database retrieval system