KEGG   Daucus carota (carrot): 108197176
Entry
108197176         CDS       T05350                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
dcr  Daucus carota (carrot)
Pathway
dcr03030  DNA replication
dcr03410  Base excision repair
dcr03420  Nucleotide excision repair
dcr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    108197176
   03410 Base excision repair
    108197176
   03420 Nucleotide excision repair
    108197176
   03430 Mismatch repair
    108197176
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:dcr03032]
    108197176
   03036 Chromosome and associated proteins [BR:dcr03036]
    108197176
   03400 DNA repair and recombination proteins [BR:dcr03400]
    108197176
DNA replication proteins [BR:dcr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    108197176
  DNA Replication Termination Factors
   ELG1-RFC complex
    108197176
Chromosome and associated proteins [BR:dcr03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    108197176
DNA repair and recombination proteins [BR:dcr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     108197176
  Check point factors
   HRAD17(Rad24)-RFC complex
    108197176
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_assoc_2 AAA_22 AAA_16 AAA_11 AAA_24 RuvB_N DUF815 AAA_5 DNAX_ATPase_lid ATPase_2 AAA_30 AAA_14 AAA_19 AAA_3 ResIII AAA_7 bpMoxR AAA_2 SLFN-g3_helicase AAA_28 AAA_25 nSTAND3 TIP49 Mg_chelatase
Other DBs
NCBI-GeneID: 108197176
NCBI-ProteinID: XP_017220202
UniProt: A0AAF0XS16
LinkDB
Position
8:29728781..29730391
AA seq 351 aa
MGGEAAPIPMDTDDVVMTTSDPRHVRSTPWVEKYRPQSLADVAAHRDIVDTIDRLTSENK
LPHLLLYGPPGTGKTSTILAVARKIFGVQMHNMVLELNASDDRGIDVVRQQIQDFASTQS
FSFGAKSSVKLVLLDEADAMTKDAQFALRRVIEKYTKTTRFALICNHVNKVIPALQSRCT
RFRFAPLDAIHVSDRLKHVIAAEGLDVTDSGLAALVRLCNGDMRKALNILQSTHMASQQI
TEEAVYLCTGNPLPKDIEKITHWLLNESFANSYKQISEMRTRKGLALVDIVREVTMFVFK
IRMPSGVRVGLINDLADIEYRLTFGCNDKLQLGSLIATFTRARAALVASAK
NT seq 1056 nt   +upstreamnt  +downstreamnt
atgggcggagaagcggctccgattccgatggataccgacgacgtcgtcatgaccaccagc
gatccccgtcacgtcagatccactccctgggtcgagaaataccgccctcagtccctcgct
gatgtcgccgctcatcgcgacattgtcgatactattgataggctgacgagtgagaacaag
ctgccgcatttgcttctatatggaccacctggcacggggaagacgtccacaattctcgcg
gtggctcggaagatttttggggtgcagatgcataatatggtgctggagcttaatgcttct
gatgaccgtgggattgatgttgtgaggcagcagatccaggactttgctagtactcagagc
ttctcgtttggtgccaagtcgtctgttaagttggttttgttagacgaggcggatgccatg
acaaaggatgcacagtttgctcttcgtcgagtgattgagaaatacacgaagactactagg
tttgccttgatttgtaatcatgtgaacaaggttattcctgcactgcagtctagatgtaca
cgatttcggtttgctcctcttgatgcaattcatgtttcggaccggcttaagcatgtcatt
gctgcagaaggacttgatgtgactgatagtggcttggcagcacttgtacgcctttgcaat
ggtgatatgagaaaagctttgaatattttgcagtcaacacatatggcttctcagcaaata
acggaagaagctgtctatctttgcactgggaatccgttgcctaaagacattgaaaaaata
acacactggcttttaaatgagtcctttgcaaatagttataaacagatatcggagatgagg
acaaggaaaggattggctttggtggatattgtcagagaagtgaccatgtttgtctttaag
atcaggatgccctcaggtgttcgagttggtctcatcaacgatttggctgacattgagtac
aggttgacttttgggtgcaatgataaattgcaacttggctctttgattgctactttcaca
cgcgctagagctgcgctggttgcctctgcaaagtag

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