Daucus carota (carrot): 108197438
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Entry
108197438 CDS
T05350
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 27
KO
K15170
mediator of RNA polymerase II transcription subunit 27
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
dcr03021
]
108197438
Transcription machinery [BR:
dcr03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
108197438
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GFIT
Motif
Pfam:
Med27
DUF4248
Motif
Other DBs
NCBI-GeneID:
108197438
NCBI-ProteinID:
XP_017220548
UniProt:
A0A175YR99
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Position
8:29866494..29871337
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AA seq
409 aa
AA seq
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MQQQQQSPPAPATTEAPPKQVALAMDRLNHAGRLIADIRLGADRILEAMFMAGQNRQSNK
PLKLIVQEESSMRQFLQDLRAVGKQLEDSGVLNESLRSRSNSWGLHMPLVCPDGAVVAYA
WKRQLAGQAGASAVDRTRLALKAFTDQKKRFFPHLDDDNETGSPLKKRCDKETSTGSEEE
EPSELTTVSDILLSLEKEVQDVKTFTYQRLKWLKRAALLPMSSSEPFMDPSKEHSFHNSN
KLGHSTMKDDAAGKISVIELLFPSIFRAVLSLHPAGSVYPDAVAFFSPDEGGSYLHARGF
SVHHVFRHITEHAALALQYFTGIKAETALHSLLLWICSYRTLFTKVCSKCRRLLSMDKQS
ALMLPPVQRPYRDFPVRKFTSSEQSSATNHYQIIDSIEAYHIGCFPEEI
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcagcagcaacaacagtcccctccggcgccggcgactacggaggcgccgccgaagcaa
gtggccctagcaatggaccgcctgaaccacgccggccgtttgatcgccgacatcagatta
ggcgccgaccggattctcgaagccatgttcatggccggtcaaaaccggcagtcaaacaag
cccttaaaattaatcgtccaagaagagtcttctatgcgccagtttctccaggacctccgt
gccgtcggaaagcagctagaagattctggggttctgaatgaatctcttcgctcaagaagc
aattcttggggtcttcacatgcctttggtatgcccagatggcgctgttgttgcatatgcg
tggaaacgtcaacttgctggtcaggctggtgcatctgctgttgatcggaccaggttggca
ttgaaggcatttactgatcagaagaagagattctttccccatcttgatgatgataacgag
accggatcaccattgaagaaacgttgtgataaggaaacatcaacagggagcgaggaagag
gagccgagcgaattaacaacagtatctgatattctgttgtccctggaaaaagaagtccag
gacgtcaaaacttttacataccagcggttgaaatggttaaaacgcgcagccttgctaccc
atgtcatctagtgagccctttatggacccatcaaaagagcacagctttcataactcaaat
aagttaggacactcaacaatgaaagatgatgccgcagggaagatttctgtaattgagctg
ttgtttccttcgatcttcagagctgtactgtccttgcatccagctggctctgtgtatcct
gatgctgtggctttcttttcacctgatgagggtggcagctatctacatgctaggggtttt
tctgttcatcatgtattcagacacataacggaacatgctgctctagcactgcagtacttt
accggcatcaaagctgaaacagcattacattccctgttgctatggatatgcagctatcga
actctattcaccaaagtctgcagtaaatgtcggcgcctgctgtcaatggacaaacaatct
gctctgatgctacctcctgttcaacgcccttatcgggactttcctgttagaaagtttaca
tcaagcgaacaaagctcagccactaatcactaccagataattgacagcattgaggcttat
catatcggctgctttccagaggaaatatag
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