Daucus carota (carrot): 108197581
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Entry
108197581 CDS
T05350
Name
(RefSeq) E3 ubiquitin-protein ligase RHF1A-like
KO
K19043
E3 ubiquitin-protein ligase RHF [EC:
2.3.2.27
]
Organism
dcr
Daucus carota (carrot)
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
dcr04121
]
108197581
Enzymes [BR:
dcr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108197581
Ubiquitin system [BR:
dcr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108197581
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_UBOX
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-RING_5
zf-RING_11
zf-ANAPC11
zf-C3HC4_4
zf-Nse
PHD_NSD
zf-C3HC4_3
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
108197581
NCBI-ProteinID:
XP_017220722
LinkDB
All DBs
Position
8:complement(27081386..27086505)
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AA seq
348 aa
AA seq
DB search
MSDSISSPPPIISSAADDIAGDDVCSICLEPFNFTHDPPSVTNCKHEYHLQCILEWSQRS
KECPICWQILSLKDPASQELLDAVENERILRSRLEAPQINEHEDSPYVDASEFDEHIIRN
FAAAASRLRHANRRRRQRSAGTGPSQVHLSAREEFQYFGSEPSQVNSEVYIPSTFFIDPT
PPNMSSSVGNVVSHTIDTRDATVEPRQQPPGSPPNSNISESISFPETIKSKISAASARYK
DSFSKGTRGFKEKLFARNSSVKELSREVHREMSAGIAGVARMIERLDFASKRTGAPAPSS
KNDGGITNLTSKGKGVDQSHHETTRETTDDVSSDPIEVRPAVSLQIKN
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattctatttcttcgccgcccccgatcatatcctccgccgccgacgacattgcc
ggcgatgatgtctgcagtatctgtctcgagcctttcaatttcactcatgatcctccctct
gtgacgaactgcaagcatgagtatcatctccagtgcattcttgaatggtcacaaagaagt
aaagaatgcccaatttgctggcagattctttccttgaaggatccggcaagccaagaactt
ttagatgcagtggaaaatgagaggatcctgagatcaagactcgaggctccccagattaat
gaacatgaggattctccatacgtggatgcttctgaatttgatgagcatattattagaaat
tttgctgctgcagcaagcagacttcgtcatgctaacagaagacgaagacagaggtctgct
ggaacaggtccatcacaagtccatctctcggcacgagaggagtttcaatattttggcagt
gagccatcacaagttaattcagaagtatatatcccgtcaactttttttatagatccaact
ccaccaaacatgtcctcgtcagttgggaatgttgtttctcatactattgacaccagagat
gctacagttgagcccagacagcaaccacctggtagtcctccaaattcaaacatttcagag
tccatcagttttccggagactattaaatctaaaatatctgctgcctcagccaggtataag
gactcattctcaaaaggcacacggggttttaaggaaaaattgtttgctcgcaatagctca
gttaaggaactgagcagagaagttcatcgtgagatgagtgcaggtatagctggtgttgcg
aggatgatcgagcgcctagattttgcctctaaaagaacaggagcgcctgctccttcatca
aaaaatgatggtggaatcacaaacttgacttctaaaggcaaaggtgtagatcaatctcat
catgaaaccaccagagagactactgatgacgttagttcagatccaattgaagtccgccct
gcagtttcactacagattaaaaactga
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