Daucus carota (carrot): 108197600
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Entry
108197600 CDS
T05350
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31 homolog isoform X1
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108197600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108197600
Spliceosome [BR:
dcr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
108197600
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Motif
Other DBs
NCBI-GeneID:
108197600
NCBI-ProteinID:
XP_017220745
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All DBs
Position
8:27652014..27654208
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AA seq
280 aa
AA seq
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MAPIEIDVFRFGSDDEVTELPESQLNIEFIKQRVEDFLEIHHVPSRGLDLTSEGLIFDAI
HFLMKIENELYVMFRRHFSGPESVVKKTVTDWINEEHHDESFDHVLELVSLRKRLVDLVD
GWVVYSAPNLSALVGTLVAGKIMVTAGGLGFLAKMPSCNIQLLGFQNIFLDGLPAKFTLG
YLQESEILQTFPSAVTRGAALVLAANCRTAARFDFMETDPSGSTGKHLREVVLNKLRRYE
KRLLPGLGELDQSTPPESGEKQGRFSGVGLVAKPWEIAKW
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgattgagattgatgtcttccgctttggaagcgacgatgaggtcacagaactc
cctgaatcgcagttgaacattgagtttatcaagcagagagttgaagattttctcgaaatt
catcatgttccctcccgtggactagatttgacatctgaagggcttatttttgatgctatt
cattttttgatgaaaattgaaaacgagttgtatgtgatgtttcgtcgccacttttcgggg
cctgaatccgttgtcaaaaaaactgtaacggattggattaatgaggagcatcatgatgag
tcatttgatcacgtgcttgaacttgtttcactgaggaagaggcttgtggacttggttgat
ggttgggtggtttacagtgcacccaacctctctgccctagttggaacattggttgcggga
aagattatggtcacggctggtggattaggattcttagcaaagatgccttcttgtaacatc
caactcctcggattccaaaacatttttctagatggactacccgctaaatttaccctaggc
tatcttcaggagtctgaaattttgcaaacctttccatcagcggtaaccaggggtgctgct
cttgtgcttgctgccaactgtcgtactgctgcgcgatttgattttatggaaacagatcca
tctggaagtacaggaaaacatttgcgagaagttgttctcaacaagcttagaagatatgaa
aagaggctcttaccaggacttggagagcttgaccagagtacaccgccggaatctggagag
aaacagggtagattttccggagtaggtctggtggcaaagccctgggagattgcaaaatgg
tga
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