Daucus carota (carrot): 108197668
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Entry
108197668 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108197668
KO
K08507
unconventional SNARE in the endoplasmic reticulum protein 1
Organism
dcr
Daucus carota (carrot)
Pathway
dcr04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
108197668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
dcr04131
]
108197668
Membrane trafficking [BR:
dcr04131
]
SNARE
SNAP-25[C] (Qc)
Use1
108197668
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Gene cluster
GFIT
Motif
Pfam:
Use1
BORCS6
HAUS-augmin3
DUF1359
Motif
Other DBs
NCBI-GeneID:
108197668
NCBI-ProteinID:
XP_017220845
UniProt:
A0AAF0XS34
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Position
8:29970199..29976613
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AA seq
237 aa
AA seq
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MTVVSKNEVNLRRLLAAAPHQENQAKLVHYVATLRELLEQLTEEKTPEGLPRISKAKVNE
YSEKIQAVAAKLAMPVSDIEIAEELIVETSIRESSPKGDGKHILDSQGLRRRSSSIKERS
HDNVVTDQSVPVKLDTAAQTHIAKHRKLQEDLTDEMVVLARQLKESSQLMSQSLQNTEKI
LDSTEKAVEHSLASTGHANTRAMEVYSHSFKTTCFTWLAIFAMTCIFIMVVLLIRIT
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggtgtctaagaatgaagtaaacctccggagattgcttgcagcagctcctcac
caagaaaaccaggcaaagcttgtccactatgttgcaactctaagagaattgttggagcag
ttaactgaagagaaaactcctgaaggattgccgaggatatctaaggcaaaggtgaacgaa
tattcagagaagattcaagcagttgctgctaagctagctatgcctgtgtctgatatagaa
atagctgaagagcttatcgtagagacttctatccgtgaaagctctccaaaaggtgatggg
aagcatattcttgattctcaaggtctgaggagaagatcttccagtatcaaggaaagatct
catgataatgttgttactgatcaatcagtgcctgtaaagttggacactgctgcacaaacg
catattgcaaagcataggaagcttcaggaagacctgacagatgagatggttgtattggca
cgccaactcaaagagagtagtcaattgatgagccaatcactacagaatactgagaaaata
ctcgactcaacagagaaagctgttgagcatagcttagcaagcaccggtcatgccaatacc
cgagcaatggaggtatactcccatagttttaagactacatgcttcacatggcttgcgatt
tttgcaatgacttgcattttcatcatggtagtactccttatccgtatcacttag
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