Daucus carota (carrot): 108197740
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Entry
108197740 CDS
T05350
Name
(RefSeq) DNA repair protein XRCC4
KO
K10886
DNA-repair protein XRCC4
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108197740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
dcr03400
]
108197740
DNA repair and recombination proteins [BR:
dcr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
108197740
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XLF
YscO-like
Motif
Other DBs
NCBI-GeneID:
108197740
NCBI-ProteinID:
XP_017220925
UniProt:
A0AAF0XR66
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Position
8:complement(26086908..26091284)
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AA seq
255 aa
AA seq
DB search
MEASRHTCLKLDIGPDSGPVFVKGTWYNSHFELLITDGLNAWSCNGSEEEVKDRAFQWDQ
SVSEYIQLAERYLGFQHPESVYGFNDAANGHKRLSWTFEREGTKLEWRWKCRPSSNSKQS
TALILDFLMDSNIRLSEEVVKKTQLSEKLKEEAEKCLAQSEKFCSEKAEFETAVYEKFLR
VLNSKKAKLRELRDRLSKQGASGKLEEEDEEVSTDKTESFDERSDDEKGEDELSKDLPSS
SKNILASRPHGRKRK
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggaagcaagcagacacacgtgcttaaaactggatatcggacccgactccggacccgtt
tttgtaaaaggcacttggtacaattcccactttgaactcttgataactgatggccttaat
gcttggtcttgcaatggatcagaagaggaagttaaggatagggcttttcagtgggatcaa
tccgtttctgaatatattcagttggctgaacgttatttggggtttcagcatcccgagtcg
gtttacgggttcaatgatgctgccaatggccataaaagattatcatggacattcgaaagg
gaagggactaagctagagtggcgatggaagtgtcggccatcatctaacagcaagcaaagt
acagctttaatattggactttctcatggattcaaacatacgtttgagtgaggaagtggtt
aaaaaaacccagttatctgagaagctaaaagaggaggctgaaaaatgtctagcacaaagt
gagaaattctgcagcgagaaagcagaatttgagactgcagtctatgaaaagtttcttaga
gttctaaactcgaagaaggcaaaactaagagagcttcgcgatcggctatcaaaacaagga
gcctcagggaaattggaggaagaagacgaagaagtgtctactgataaaactgagagtttt
gatgagagaagcgatgatgagaagggtgaggacgagctctccaaggatcttcccagtagt
tcaaagaatatattagcaagcaggcctcatggtagaaagagaaagtag
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