KEGG   Daucus carota (carrot): 108198398
Entry
108198398         CDS       T05350                                 
Name
(RefSeq) polygalacturonase
  KO
K01184  polygalacturonase [EC:3.2.1.15]
Organism
dcr  Daucus carota (carrot)
Pathway
dcr00040  Pentose and glucuronate interconversions
dcr01100  Metabolic pathways
Module
dcr_M00081  Pectin degradation
Brite
KEGG Orthology (KO) [BR:dcr00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00040 Pentose and glucuronate interconversions
    108198398
Enzymes [BR:dcr01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.1  Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
    3.2.1.15  endo-polygalacturonase
     108198398
SSDB
Motif
Pfam: Glyco_hydro_28 Pect-lyase_RHGA_epim Sld7_N
Other DBs
NCBI-GeneID: 108198398
NCBI-ProteinID: XP_017221642
LinkDB
Position
8:complement(23997434..24000897)
AA seq 395 aa
MMTRAIMGYIFATLCLAFFKHSASAAVSSYNVQELGAKADGTTDSTKFFLSAWSLACASN
VSAQVYVPSGKYLISNAVVFSGRNCKRTMVMRIDGTIIAPADYNLIANDEIWIKFDNVNG
LYISGGTVDAQAAPLWACKASGNSCPTGATSLGFYSSRNIVVSGIASINSQMFHMIVYKC
NNTKLQGIKISAPVDSPNTDGIHVQLSTGVSILSSQIGTGDDCVSIGPGTTDTWIESVSC
GPGHGISIGSLGWNLQEPGVQNLTVKTVTFRNTENGVRIKTWARSSTGFVNNVLFQHISM
GNVKNPILIDQDYCPNQENCPDKVSGVKISNVIYQDIHGTSATPVALRLQCSKSFPCSGI
RLQDVELTYNNQSATSSCANAAGEASGVMKPSSCL
NT seq 1188 nt   +upstreamnt  +downstreamnt
atgatgactcgtgccataatgggctatatttttgccacactatgcttggcctttttcaag
cattcagcctcagcagctgtatcatcttacaatgttcaagaattgggagcaaaagctgat
ggcaccacagactcaacaaagttttttctaagtgcttggagcttggcttgtgcttctaat
gtttcagcccaagtgtacgtgccctcgggtaaatacttgatcagcaatgccgtggtcttt
agcggccgcaactgtaaaaggactatggttatgcgtattgatggcacgatcatagctcct
gctgattacaatcttatagccaatgatgaaatctggatcaagttcgataatgttaatgga
ctttatatctctggcggaaccgtagacgctcaggctgcgcctctgtgggcttgcaaagcc
tcggggaatagctgccctacaggggcaacgagtcttgggttctacagctcaaggaacatt
gttgtgagtggaatagcatcaataaatagtcaaatgtttcatatgattgtctataagtgc
aacaacacaaagctacaaggaatcaagatttcagcgcctgttgatagccccaacaccgac
ggaattcacgtacagttgtcaacaggagtcagcatactgagctctcaaattggtaccgga
gatgactgcgtctcaattggacctgggactactgacacatggattgaaagtgtgtcgtgc
ggccccggtcacggcattagcatcggaagtcttggttggaatttgcaagaacctggagtc
cagaatctgacagttaaaacggttaccttcagaaataccgaaaatggagtcagaattaag
acatgggcgaggtctagcacagggtttgttaataatgttctttttcagcacatttctatg
ggtaatgtcaaaaatcccattctaattgatcaagactattgtcctaatcaagaaaattgc
cctgataaggtttcgggtgtgaagatcagcaatgtgatatatcaagatattcacggaaca
tcagcaacaccagttgcattgaggttgcagtgtagcaaaagctttccttgcagtggaata
aggcttcaagacgttgagctaacttataacaatcagtcagccacatcatcatgcgctaat
gctgcaggagaagcatctggcgttatgaagccttctagctgtttatag

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