Daucus carota (carrot): 108198470
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Entry
108198470 CDS
T05350
Name
(RefSeq) uncharacterized protein LOC108198470
KO
K03283
heat shock 70kDa protein 1/6/8
Organism
dcr
Daucus carota (carrot)
Pathway
dcr03040
Spliceosome
dcr04141
Protein processing in endoplasmic reticulum
dcr04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
dcr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108198470
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
108198470
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
108198470
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
dcr01009
]
108198470
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
dcr03041
]
108198470
03009 Ribosome biogenesis [BR:
dcr03009
]
108198470
03110 Chaperones and folding catalysts [BR:
dcr03110
]
108198470
04131 Membrane trafficking [BR:
dcr04131
]
108198470
03051 Proteasome [BR:
dcr03051
]
108198470
03029 Mitochondrial biogenesis [BR:
dcr03029
]
108198470
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
dcr04147
]
108198470
Protein phosphatases and associated proteins [BR:
dcr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-5
PP5-interacting proteins
108198470
Spliceosome [BR:
dcr03041
]
Complex B
Other components
Prp19 complex
108198470
Complex C
Prp19-CDC5 complex
108198470
Ribosome biogenesis [BR:
dcr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
108198470
Chaperones and folding catalysts [BR:
dcr03110
]
Heat shock proteins
HSP70 / DNAK
108198470
Membrane trafficking [BR:
dcr04131
]
Endocytosis
Clathrin-mediated endocytosis
Other core components
108198470
Autophagy
Chaperone mediated autophagy (CMA)
Chaperones
108198470
Proteasome [BR:
dcr03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
108198470
Mitochondrial biogenesis [BR:
dcr03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
108198470
Exosome [BR:
dcr04147
]
Exosomal proteins
Proteins found in most exosomes
108198470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSP70
MreB_Mbl
FGGY_C
Acetyltransf_14
DUF3440
COG3_N
Motif
Other DBs
NCBI-GeneID:
108198470
NCBI-ProteinID:
XP_017221714
LinkDB
All DBs
Position
8:complement(27615392..27618014)
Genome browser
AA seq
621 aa
AA seq
DB search
MTNKEVAVGIDLGTTYSCVGVWQHDRVEIIANDQGNRTTPSCVAFTDLERFIGEAAKNQA
AFNPANTIFDAKRLIGRKFSDSTVKDNMKFWPFTVVGDSDDRPKIVVNYRGVEKRFSPEE
LSSMVLYKMKETAEKYLGKEVKNAVVTVPAHFSDSQRQATKDAARIAGLNVLRILVEPTA
AAVAYGLDQKLTSSSSGENIVLVFDLGGGTFDVSLLNIAKNSCKVVATAGDTHLGGEDFD
NRLLKYLVEEFSRKHGKDISKNAKSLRRLRNACEKAKRVLSHSAMTTVDIDSLYEGIDYH
AKISQARFEALNLNLFRSCLDTVEKCLRDAEMDKNNVQEVVLVGGSTRIPKVQQLLQQFF
NGKELCKNINPEEAVAYGAAVQAAILSGKGSQNIKNLMVLDVTRPINGLSSNDDLMDVII
PRNTTYPISVEQTYYRIKDDQKAVRIGVYEGESTRVADNNLLGDFVLSELPPAPSSKDDI
LVTFTIDANGVLIVFAEHKSSGLKNSIKFIKGGTLSEEEIEVMVKDAERLKAEDEEFRKK
VKAILAFEDYIHNMKAISQKNCMLEASVKEMLSYYFKEVIEWLNSNKNAELYEFKYKKLQ
LEAICNKFIPGSEGMEIEDYE
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaccaataaggaagtagccgttggaattgatctaggtactacatactcttgcgttgga
gtatggcaacatgatcgagttgaaatcatcgcaaatgaccagggtaacagaactacaccc
tcatgtgttgcttttactgatttggagcgtttcatcggtgaagctgctaaaaatcaggct
gcttttaatcctgcaaacactatttttgatgctaaaaggttgattgggaggaaattttcg
gattcaacagtgaaagataatatgaagttctggccatttacggtggtcggtgattctgat
gacaggcccaagatagttgtgaattaccgaggtgtggagaaacgattctcacccgaggag
ttgtcttccatggttctctataaaatgaaagaaactgctgagaaatacttgggaaaggag
gtaaagaatgctgttgtcactgtccctgcgcactttagtgattcacagcgccaggcgacg
aaagatgcagcaagaatagctggactcaatgtattgagaatccttgttgagccgacagct
gctgcagttgcttatggtcttgaccaaaagcttacaagtagctcatcaggggagaatata
gttcttgtttttgatcttggtggtggtacttttgatgtttctctccttaatattgcaaag
aatagctgtaaagtagtggctactgcaggtgatactcaccttggaggtgaggactttgac
aatcgtttgctgaaatatttagttgaggaattttcaaggaagcatggaaaagacataagt
aaaaatgctaaatccttgagaagattgagaaatgcttgtgaaaaggcgaagagggtttta
tctcacagtgctatgacaacagttgatatagattctttgtatgagggaattgattatcat
gcaaaaattagtcaggccagatttgaggctttaaatttgaatctatttagaagttgtctg
gacactgtagagaagtgtttgagagatgctgagatggacaaaaacaatgtacaggaagtt
gtgcttgtgggtggatctactagaattcccaaagtgcaacagttgctgcagcagtttttt
aatgggaaggaactttgcaagaatataaatcctgaagaggctgttgcttatggggcagct
gtccaagctgccatattaagtggcaagggtagtcagaatatcaagaatttgatggtgctt
gatgttactcgacccataaatgggctttcgagtaatgatgatctcatggatgtaattatt
ccgaggaacacaacttatcccatttcagtggaacaaacatattatagaattaaagatgat
caaaaagctgttagaattggagtatacgagggggagagtacaagagtggcagataataat
ttacttggggattttgtactatctgaactgcctcctgccccaagcagcaaagatgatatt
ttggtgacctttacaattgatgccaacggggtactaattgtttttgcagagcataagagt
tctggactgaagaacagcattaaatttatcaaaggaggaacgctatcagaggaggagatt
gaagtgatggtaaaggatgctgaacgtttgaaggctgaagatgaggaattcaggaaaaag
gtcaaggcaatacttgcatttgaggattatatacataacatgaaagccatcagccaaaag
aactgcatgcttgaagcttctgttaaagagatgctaagttattatttcaaggaggtaatt
gaatggctaaactcaaacaagaatgctgaactatatgaattcaaatacaagaagctgcag
ctcgaagcaatctgcaataaattcattcctggcagtgaaggtatggagattgaggactat
gagtaa
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